Optically Computed Optical Coherence Tomography
20210267457 · 2021-09-02
Assignee
Inventors
Cpc classification
G01B9/02044
PHYSICS
G06E3/003
PHYSICS
G01B9/02091
PHYSICS
A61B2576/00
HUMAN NECESSITIES
G16H50/20
PHYSICS
G01B9/02083
PHYSICS
A61B2562/0233
HUMAN NECESSITIES
International classification
A61B5/00
HUMAN NECESSITIES
G06E1/04
PHYSICS
Abstract
An optically computed optical coherence tomography (OC-OCT) technology is disclosed. The OC-OCT system performs depth resolved imaging by computing the Fourier transform of the interferometric spectra optically. The OC-OCT system modulates the interferometric spectra with Fourier basis function projected to a spatial light modulator and detects the modulated signal without spectral discrimination. The optical computation strategy enables volumetric OCT imaging without performing mechanical scanning and without the need for Fourier transform in a computer. OC-OCT performs Fourier transform signal processing optically, without the need of mechanical scanning, and before data acquisition unlike traditional OCT methods and systems. The scan-less OCT imaging is achieved through the use of spatial light modulator (SLM) that precisely manipulates light wave to generate output with desired amplitude and phase.
Claims
1. A method for optically computed optical coherence tomography (OC-OCT), comprising: performing a depth resolved image of an object by an optically computed optical coherence tomography (OC-OCT) system; optically computing a Fourier transform of an interferometric spectra and performing signal processing of the image before image data acquisition, unlike conventional OCT wherein image data acquisition is performed before signal processing; and wherein the OC-OCT system eliminates mechanical scanning in tomographic imaging and performs computation optically of the image without requiring transfer of image data into a computer to perform computation tasks for image reconstruction and data analysis.
2. The method claim 1, further includes: using a spatial light modulator (SLM) to manipulate a light wave to generate output with a desired amplitude and phase for computation and to produce a scan-less three dimensional (3D) OCT image.
3. The method of claim 2, wherein the optical computation of the Fourier transform further includes modulating the interferometric spectra with the SLM that is programmable, and then performing spectrally non-discriminative detection of the object.
4. The method of claim 1, further comprising modulating the interferometric spectra with Fourier basis function projected to a spatial light modulator (SLM) and detecting the modulated signal without spectral discrimination.
5. The method of claim 1, wherein the OC-OCT system manipulates optical signals in both spatial and spectral domain for computation.
6. The method of claim 1, further includes observing transient phenomena in the object selected from a group consisting of neural activity, blood flow dynamics, and any combination thereof.
7. The method of claim 1, wherein the imaging is done on a biological tissue.
8. The method of claim 7, wherein the biological tissue is soft tissue, and wherein the soft tissue is deep tissue selected from the group consisting of breast tissue, skin, brain tissue, muscles, tendons, ligaments, connective tissue, lung tissue, liver tissue, kidney tissue, intestinal tissue, stomach tissue, heart tissue, bladder tissue, pancreatic tissue, spleen tissue, and any combination thereof.
9. The method of claim 1 further includes obtaining in situ 3D imaging of the biological tissue.
10. The method of claim 1 further includes extracting a signal from a specific depth in the object directly without signal processing in a computer; and wherein depth resolution is by optically Fourier transforming a spectral interferogram.
11. The method of claim 1 further includes phase resolved volumetric OCT imaging without mechanical scanning, and imaging an arbitrary 2D plane in a snapshot manner.
12. A method for optically computed optical coherence tomography (OC-OCT), comprising performing depth resolved imaging by computing a Fourier transform of an interferometric spectra optically; modulating the interferometric spectra with Fourier basis function projected to a spatial light modulator (SLM) and detecting the modulated signal without spectral discrimination.
13. An optically computed optical coherence tomography (OC-OCT) system, comprising an optical computation module for directly outputting a depth resolved OCT signal of an object, a low coherence interferometer in communication with the optical computation module for imaging the object; wherein, the optical computation module including a spatial light modulator (SLM) sized to manipulate a light wave to generate output with a predetermined amplitude and phase; and wherein the optical computation module in OC-OCT performs Fourier transform optically before data acquisition by calculating an inner product between a Fourier basis function projected by the spatial light modulator (SLM) and a Fourier domain interferometric signal.
14. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the spatial light modulator (SLM) enables volumetric three dimensional (3D) OCT imaging without performing mechanical scanning and without the need for Fourier transform in a computer.
15. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the optical computation module further includes a polarization beam splitter (PBS) in communication with a beam splitter (BS) in the low coherence interferometer.
16. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the low coherence interferometer further includes a broadband source to illuminate the interferometer.
17. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the low coherence interferometer further includes a reference mirror and a sample arm for the object being scanned.
18. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the SLM is a programmable SLM; and the optical computation of Fourier transform is achieved by modulating the interferometric spectra with the programmable SLM and then performing spectrally non-discriminative detection.
19. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the optically computed optical coherence tomography (OC-OCT) system is used for a clinical diagnosis.
20. The optically computed optical coherence tomography (OC-OCT) system of claim 13, wherein the optically computed optical coherence tomography (OC-OCT) system images an arbitrary 2D plane in a snapshot manner.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0018] The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawings(s) will be provided by the Office upon request and payment of the necessary fee.
[0019] To assist those of skill in the art in making and using the disclosed optically computed optical coherence tomography and associated systems and methods, reference is made to the accompanying figures, wherein:
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DETAILED DESCRIPTION
[0028] Exemplary embodiments are directed to an Optically Computed-Optical Coherence Tomography (OC-OCT) system and process of using same. It should be understood that different embodiments could generally be applied. Optically computed OCT (OC-OCT) technology disclosed herein eliminates the need for mechanical scanning in 3D OCT imaging by employing a highly novel optical computation system to perform Fourier transform. For conventional Fourier domain OCT, data is acquired and transferred to PC where Fourier transform is performed to reconstruct depth profiles of the sample. OC-OCT performs signal processing optically before the signal is detected by the camera.
[0029] The optical computation procedure is achieved by using a spatial light modulator (SLM). SLM is known as being used in other applications such as optical pulse shaping, structured illumination, and optical computation. However, SLM has not been used in OCT imaging until now. Using SLM, light wave can be precisely modulated to have the anticipated amplitude and phase. The spectral interferogram output from a spectral domain OCT system is modulated by a programmable SLM to achieve Fourier transform optically. The signal is later detected without spectral discrimination. An optically computed two-dimensional image at a specific depth determined by the SLM pattern is thus produced. The optical computation strategy allows volumetric OCT imaging without axial or lateral mechanical scanning that is novel and has not been demonstrated before in this field.
[0030] Adverting to the figures,
[0031] OC-OCT is a Fourier domain technique that achieves depth resolution by optically Fourier transforming spectral interferogram. Consider an Ascan S (S∈.sup.N and S=[s.sub.1, s.sub.2, s.sub.3, . . . , s.sub.N].sup.T). With sample light originating from a specific transverse coordinate, the interferometer generates a spectral interferogram M after a disperser. M is a 1D vector (M∈
.sup.N and M=[m.sub.1, m.sub.2, m.sub.3, . . . , m.sub.N].sup.T) and is mathematically related to the spatial domain Ascan through Fourier transform: S=FM which is more explicitly shown in Eq (1) (s.sub.n represents spatial domain OCT signal at the n.sup.th discrete depth in an Ascan; m.sub.k represents spectral signal at the k.sup.th wavenumber; F∈
.sup.N×N is the Fourier transform matrix and Fnk=e.sup.j2πnk/N).
[0032] As illustrated in
[0033] According to the above Equation (1), s.sub.n, the OCT signal at the n.sup.th discrete depth in an Ascan, can be expressed in Eq (2) that shows s.sub.n is the inner product between vector ƒ.sub.n (the transpose of n.sup.th row of the Fourier matrix F) and vector M. In Eq (2), .Math. indicates vector inner product.
[0034] Equation (2) provides an alternative approach to address a spatial location in OCT imaging. As illustrated in
[0035] The configuration of one embodiment of an OC-OCT system that allows depth resolved imaging with an extended field of view is illustrated in
[0036] The imaging principle of the OC-OCT system is explained as follows. First, the OC-OCT configuration in
[0037] Reflected by the SLM and diffracted again by the grating, the light rays originating from (x.sub.0,y.sub.0) at the sample are collimated and eventually focused to (x.sub.0,y.sub.0) at the detector plane for spectrally non-discriminative detection, for a magnification of 1 from the sample plane to detector plane without loss of generality. On the other hand, depth resolution is achieved through optical computation. The diffraction grating disperses the output of the interferometer along x direction and the SLM projects a Fourier basis function (ƒ.sub.n) to its row at a specific y coordinate (y=y.sub.0), as illustrated in the upper right inset of
[0038] In one embodiment, the OC-OCT system shown in
[0039] To demonstrate 3D OC-OCT imaging within a large depth range, achromatic doublet was used as imaging objectives to obtain results shown in
[0040] Prior to imaging experiments, the present inventors calibrated K(k) the mapping between the pixel index (k) in a row of SLM and the corresponding wavenumber K, because the pixels in a row of the SLM generally do not sample wavenumber domain spectral data uniformly. The calibration was achieved by measuring the interferometric spectrum obtained from a specular sample and enforcing linear phase [12]. The present inventors also calibrated R(v), the mapping between the value v projected to SLM pixels and the actual light reflectivity (R) of the SLM, because R(v) depends on the wavelength and polarization of the incident light, and is generally nonlinear. When v takes value of Fourier basis function (F.sub.nk in Eq (1)) and is directly projected to the k.sup.th pixel in a row of SLM pixels, the spectral modulation is non-sinusoidal, leading to diminished signal amplitude and ghost high harmonic peaks after optical Fourier transformation. To ensure that precise sinusoidal modulation was imposed to the interferometric spectrum, the present inventors projected the value of R.sup.−1(F.sub.nK(k)) to the k.sup.th pixel in a row of SLM pixels. Moreover, the SLM cannot directly generate complex exponential function needed in Fourier transform (Eqs (1) and (2)). Therefore, the present inventors projected cosine and sine patterns (F.sub.cos(cos(2πnK(k)/N)+1)/2 and F.sub.sin=(sin(2πnK(k)/N)+1)/2) to the SLM. The present inventors temporally interlace ƒ.sub.cos (F.sub.cos with k=1, 2, 3, . . . ) and ƒ.sub.sin (F.sub.sin with k=1, 2, 3, . . . ) for spectral modulation, synchronized the data acquisition with the alternation of cos and sin patterns, acquired signals from cosine and sine channels (s.sub.cos=ƒ.sub.cos.sup.TM−s.sub.DC and s.sub.sin=ƒ.sub.sin.sup.TM−s.sub.DC) and extracted the magnitude of the OC-OCT signal: I=(s.sub.cos.sup.2+s.sub.sin.sup.2).sup.1/2. With reference light much stronger than sample light, s.sub.DC could be estimated by Σm.sub.k obtained with sample arm blocked. To simplify subsequent description, the present inventors refer the function projected to the SLM as ƒ.sub.n that was generated after wavenumber calibration, reflectivity calibration, and temporal interlacing.
[0041] The present inventors first experimentally validated the z sectioning capability of the OC-OCT system. The present inventors assessed the axial point spread function (PSF) of the OC-OCT imaging system, using Ascans obtained from a mirror with an impulse reflectivity profile. The present inventors projected a series of complex exponential functions (ƒ.sub.n, n=1, 2, 3, . . . ) to different rows (different y coordinate) of SLM pixels. As a result, different rows of the detector received signals modulated by different complex exponential functions and came from different depths of the sample. The axial PSF (a 1D vector) was then obtained by averaging the image directly obtained from the camera along x direction. The present inventors varied the axial position of the mirror using a translation stage, and obtained axial PSFs as shown in
[0042] The present inventors demonstrated the capability of the OC-OCT system for depth resolved en face imaging. To achieve en face slicing of the sample at depth z.sub.0, the present inventors projected the same modulation pattern (ƒ.sub.n0) to different rows of the SLM. The present inventors brought the sample, a USAF1951 resolution target, to depth z.sub.0 (z.sub.0=32.30 μm) and obtained the image shown in
[0043] The present inventors also demonstrated OC-OCT for 3D imaging using onion skin cells. The present inventors projected the same Fourier basis function to different rows of the SLM to obtain en face OCT image at a specific depth. By varying the Fourier basis function, the present inventors obtained en face images at different depths in
[0044] The present inventors also obtained 3D rendered volume through OC-OCT imaging. The present inventors designed lateral patterns on a laser-plotted polyester-based photomask, and fabricated a 3D phantom by depositing photoresist layer (SU-8 2035) with 37 μm elevation on silicon substrate using the photolithography facility at Brookhaven National Laboratory. The present inventors changed the modulation function projected to the SLM to acquire en face OC-OCT data from different depths for volumetric imaging. With 2D images obtained from different depth (29 en face images obtained with a 1.25 μm axial interval), a 3D rendered volume is obtained.
[0045] The OC-OCT system described in the present disclosure enabled optically computed 3D OCT imaging for the first time to the best of the present inventors' knowledge. OC-OCT is fundamentally different from existing technologies that take transverse plane as the preferential scanning dimension. For optical coherence microscopy (OCM) and full field OCT, mechanical scanning cannot be eliminated. One significant advantage of OC-OCT is its flexibility in data acquisition.
[0046] In one embodiment of the present disclosure, the present inventors performed 3D imaging by projecting the same Fourier basis function to different rows of the SLM and sequentially acquiring en face images at different depths. If fast imaging is needed in an oblique plane, the OC-OCT system can project different Fourier basis to different rows of the SLM and make the oblique plane the dimension for preferential data acquisition. For structural OCT imaging, the present inventors measured the real and imaginary parts of complex OCT signal with the SLM generating cosine and sine modulations and calculated the amplitude of OCT signal. The real and imaginary parts of complex OCT signal can also be used for phase resolved imaging that is sensitive to nanometer scale displacement, in applications such as optical coherence elastography and imaging cell dynamics. The current OC-OCT system generated temporally interlace cosine and sine patterns for spectral modulation. Hence, its imaging speed was limited by the speed of the SLM (60 Hz refreshing rate). To fully utilize the speed of the camera, complex modulation of interferometric spectrum can also be achieved by projecting spatially interlaced cosine and sine patterns to the SLM.
[0047] Optical Computation (OC) for Snap-Shot Phase Resolved OCT Imaging.
[0048] The inventive OC-OCT allows snap-shot imaging from an oblique plane. In the OCC-OCT system, the reference light and sample light superimpose and go through an optical computation module that directly outputs depth resolved OCT signal. Within the optical computation module, interferometric light is first diffracted by a grating. The spectral interferogram M (M∈.sup.N and M=[m.sub.1, m.sub.2, m.sub.3, . . . , m.sub.N].sup.T) is then modulated by the spatial light modulator (SLM) (
.sup.N and S=[s.sub.1, s.sub.2, s.sub.3, . . . , s.sub.N].sup.T) at a specific transverse coordinate through Fourier transform: S=FM, where F∈
.sup.N×N is the Fourier transform matrix and F.sub.nk=e.sup.j2πnk/N. Conventional Fourier domain OCT imaging obtains an Ascan by acquiring the entire spectral interferogram and performing Fourier transform in a computer. For optical computation, we consider the signal at the n.sup.th discrete depth in an Ascan (s.sub.n) that can be expressed as s.sub.n=ƒ.sub.n.Math.M where .Math. indicates vector inner product and ƒ.sub.n=[F.sub.n1,F.sub.n2,F.sub.n3, . . . , F.sub.nN]′. As illustrated in
[0049] Modulated by the SLM and diffracted again by a second grating, the light rays originating from the same transverse coordinate at the sample are collimated and detected without spectral discrimination to generate s.sub.n (
[0050] For structural OCT imaging, the real and imaginary parts of complex OCT signal are measured with the SLM generating cosine and sine modulations and calculated the amplitude of OCT signal. To demonstrate complex OCT imaging, used was the cosine and sine channels output from the OC-OCT system to generate the amplitude and phase of complex signal. The same modulation pattern (f.sub.n0) was projected to all the rows of the SLM to generate OC-OCT signal from depth z.sub.0. Used then was the OC-OCT system to image the substrate and the top of the 3D phantom fabricated by photolithography. In summary, the OC-OCT system described enabled optically computed complex OCT imaging for the first time to the best of the inventor's knowledge.
[0051] The present inventors designed the magnification from the sample plane to the SLM plane, such that the diffraction limited spot size at the sample is mapped to more than two SLM pixels. As a result, the binning of SLM pixels in y dimension to extract complex OCT signal will not lead to reduced axial resolution.
[0052] By taking snapshot measurement of g∈.sup.Nx×Ny, the magnitude (Eq (3))
I.sub.i,j=√{square root over (g.sub.i,2j.sup.2+g.sub.i,2j-1.sup.2)} (3)
[0053] wherein I.sub.i,j is the magnitude of complex OCT signal and is proportional to the optical field reflected or scattered from the sample, and g.sub.i,2j and g.sub.i,2j-1 are snapshot measurements taken at different rows of the camera, modulated by the SLM with sinusoidal signals with a 90 degree phase difference;
[0054] and phase (Eq (4)) of the complex OCT signal,
[0055] wherein ϕ.sub.i,j is the phase of the complex OCT signal and g.sub.i,2j and g.sub.i,2j-1 are snapshot measurements taken at different rows of the camera, modulated by the SLM with sinusoidal signals with a 90 degree phase difference;
[0056] as well as the sub-nanometer displacement used for dynamic imaging (Eq (5)), can be extracted,
[0057] wherein d.sub.i,j is the subnanometer displacement, λ.sub.0 is an initial signal, n is the refractive index, and g.sub.i,2j and g.sub.i,2j-1 are snapshot measurements taken at different rows of the camera, modulated by the SLM with sinusoidal signals with a 90 degree phase difference.
[0058] Notably, for pixels at different transverse coordinates, the signal formation mechanism remains the same as described above, because the optical computation module establishes a one-to-one mapping between transverse coordinates (x and y) at the sample plane and those at the detector plane (illustrated as solid and dashed light beam profiles in
[0059] While exemplary embodiments have been described herein, it is expressly noted that these embodiments should not be construed as limiting, but rather that additions and modifications to what is expressly described herein also are included within the scope of the invention. Moreover, it is to be understood that the features of the various embodiments described herein are not mutually exclusive and can exist in various combinations and permutations, even if such combinations or permutations are not made express herein, without departing from the spirit and scope of the invention.
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