METHODS AND APPARATUS FOR SAMPLE ANALYSIS USING LATERAL FLOW
20210156855 · 2021-05-27
Inventors
- Andrea Ranzoni (East Brisbane, Queensland, AU)
- Sean Andrew Parsons (East Brisbane, Queensland, AU)
- Scott Robert Fry (East Brisbane, Queensland, AU)
- Christopher Robert Miller (East Brisbane, Queensland, AU)
Cpc classification
G01N33/54389
PHYSICS
G01N33/54393
PHYSICS
G01N21/6428
PHYSICS
G01N33/53
PHYSICS
G01N33/557
PHYSICS
International classification
Abstract
Methods and assays for performing a lateral flow test are disclosed. A sample is applied to a receiving portion of a lateral flow device such that the sample flows to at least a first test zone and a second test zone. First and second signals levels at the first and second test zones over an assay period are monitored. If a first analyte of interest is present in the sample, the first analyte is labelled and the presence of labelled first analyte in the sample causes one of the first and second signals levels to increase during the assay period. A change between the first and second signal levels over a period of time during the assay period is monitored. The sample can be incubated prior to application to the receiving portion to provide homogeneity to labelling and therefore a substantially linear increase of the signal level at one of the test zones and a substantially constant signal level at the other one of the test zones.
Claims
1. A method of performing a lateral flow test for making a determination about at least a first analyte of interest in a sample from a body, the method comprising: applying a sample to a receiving portion of a lateral flow device such that the sample flows from the receiving portion to at least a first test zone and a second test zone of the lateral flow device, monitoring levels of first and second signals at the first and second test zones over an assay period wherein, if the first analyte of interest is present in the sample, the first analyte is labelled and wherein the presence of labelled first analyte in the sample causes the level of one of the first and second signals to increase during the assay period; and monitoring a change between the first and second signal levels over a period of time during the assay period.
2. The method of claim 1 comprising identifying a baseline level of the first and second signals prior to an initial time point at which a front of the sample arrives at the first and/or second test zone from the receiving portion, and subtracting the baseline level from the first and second signal levels to obtain calibrated first and second signal levels after the initial time point.
3. The method of claim 1 comprising normalising the first and second signal levels.
4. The method of claim 2 comprising normalising the calibrated first and second signal levels.
5. The method of claim 3 or 4, wherein the normalisation of the first and second signal levels is based on an initial signal level peak when the sample arrives at the first and second test zones.
6. The method of claim 5, wherein the normalisation of the first and second signal levels is based on a signal level that occurs after a peak signal level when the sample arrives at the first and second test zones.
7. The method of any one of the preceding claims, wherein one of the first and second test zones is further from the receiving portion than the other of the first and second test zones, and wherein the method comprises time-shifting the first and second signals to compensate for delays in the sample reaching the test zone furthest from the receiving portion.
8. The method of claim 7, wherein the monitoring of the change between the first and second signal levels is based on the first and second signals as time-shifted relative to each other.
9. The method of claim 7 or 8, wherein the time-shifting is carried out using a lag-coefficient that accounts for an increasing delay in the sample reaching the test zone furthest from the receiving portion.
10. The method of any one of the preceding claims, wherein the monitoring of the change between the first and second signal levels after the initial time point comprises determining differences between the first and second signal levels at one or more time points.
11. The method of claim 10, wherein the monitoring of the change between the first and second signal levels comprises determining differences between the first and second signal levels at least at two different time points.
12. The method of claim 10, wherein the monitoring of the change between the first and second signal levels comprises determining a difference between the first and second signal levels at least at a test end point.
13. The method of claim 10, 11 or 12, wherein the difference between the first and second signal levels at any time point is calculated as a delta value (Δ) or a ratio value (R) and wherein the monitoring of the change between the first and second signal levels comprises monitoring an evolution of the delta value (Δ) or ratio value (R).
14. The method of any one of the preceding claims, wherein the monitoring of the change between the first and second signal levels over a period of time after the initial time point comprises at least: comparing the first and second signal levels at a first time point to obtain a signal level difference (Δi) or a ratio value (Ri) at the first time point, comparing the normalised first and second signal levels at a second time point to obtain a signal level difference (Δf) or a ratio value (Rf) at the second time point, and comparing the signal level difference (Δi) at the first time point with the signal level difference (Δf) at the second time point or comparing the ratio value (Ri) at the first time point with the ratio value (Rf) at the second time point.
15. The method of any one of the preceding claims, wherein the method is to make a determination about medical condition of a human or animal body based on the determination about at least the first analyte.
16. The method of claim 15, when dependent on claim 14, wherein the comparing of the signal level differences or ratio values produces a test value and wherein the determination about the medical condition is based on whether or not the test value is above or below one or more threshold values.
17. The method of claim 15, when dependent on claim 12, wherein the determining of a difference between the first and second signal levels at least at the test end point produces a test value and wherein the determination about the medical condition is based on whether or not the test value is above or below one or more threshold values.
18. The method of claim 15, when dependent on claim 11, wherein the determination of differences between the first and second signal levels at least at two different time points produces test values for the different time points and wherein the determination about the medical condition is based on whether or not the test values are following a trend.
19. The method of claim 18, wherein the trend is a continuous increase or decrease of the test values for successive time points.
20. The method of any one of the preceding claims, wherein the method is to make a quantitative determination about a level of the first analyte in the sample and/or a human or animal body providing the sample.
21. The method of any one of the preceding claims, comprising labelling the first analyte of interest in the sample prior to application of the sample to the lateral flow device.
22. The method of claim 21, wherein the labelling is performed by incubating the sample with a first mobilisable capture reagent comprising labels, wherein the first mobilisable capture reagent is able to bind specifically to the first analyte of interest, if present in the sample, to form a plurality of first labelled complexes.
23. The method of claim 21 or 22, wherein the incubating is carried out for a period of at least 10 seconds, at least 20 seconds, at least 30 seconds, at least 1 minute, at least 2 minutes, at least 5 minutes, at least 7 minutes, at least 10 minutes, at least 15 minutes, at least 20 minutes, at least 25 minutes or at least 30 minutes.
24. The method of claim 21, 22 or 23, wherein the incubating further comprises mixing the sample with a buffer solution.
25. The method of any one of claims 21 to 24, wherein the incubating is carried out by depositing the sample into the interior of a vessel, the interior of the vessel being separate from the lateral flow device.
26. The method of claim 25 wherein, prior to the depositing of the sample into the interior of the vessel, the at least a first mobilisable capture reagent is located on an inner surface of the vessel.
27. The method of any one of the preceding claims, wherein the detectable labels are fluorescent labels.
28. The method of claim 27, wherein the fluorescent labels each comprise one or more quantum dots.
29. A lateral flow assay for making a determination about at least a first analyte of interest in a sample from a body comprising: a lateral flow device, comprising: a receiving portion and at least first and second test zones, the receiving portion being configured to receive a sample such that the sample flows from the receiving portion to the first and second test zones, a reader configured to: monitor levels of first and second signals at the first and second test zones over an assay period wherein, if the first analyte of interest is present in the sample, the first analyte is labelled and wherein the presence of labelled first analyte in the sample causes the level of one of the first and second signals to increase during the assay period; and monitor a change between the first and second signal levels over a period of time during the assay period.
Description
BRIEF DESCRIPTION OF DRAWINGS
[0064] Embodiments of the present disclosure are now described by way of example with reference to the accompanying drawings, in which:
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DETAILED DESCRIPTION OF EMBODIMENTS
[0083] Embodiments of an apparatus and a method for performing a lateral flow test, for making a determination about at least a first analyte of interest in a sample from a body, are now described. The apparatus and method may provide for a quantitative or semi-quantitative determination about at least the first analyte of interest to be made. In some embodiments, the determination about at least the first analyte of interest may provide or lead to a determination about a medical condition of a human or animal body from which the sample was received.
[0084]
[0085] As shown in
[0086] Referring also to
[0087] At 202, levels of first and second signals at the first and second test zones 112a, 112b over an assay period are monitored. If first analyte of interest is present in the sample, the first analyte is labelled in the sample, prior to reaching the first and second test zones. If labelled first analyte is present in the sample, the level of at least one of the first and second signals increases during the assay period.
[0088] Referring again to
[0089] At 203, processing of the signals/signal levels is carried out, e.g., by the reader 120 or more specifically the processor 123 of the reader. For example, in the processing, identification is made of a baseline level of the first and second signals that is prior to an initial time point at which a front of the sample arrives at the first and/or second test zone 112a, 112b from the receiving portion 111. The baseline level can be subtracted from the first and second signal levels to obtain calibrated first and second signal levels after the initial time point. The baseline level may be indicative of a “dry read” for the first and second signals at the first and second test zones 112a, 112b. The baseline level may be indicative of the signals level at the first and second test zones 112a, 112b that does not result from the presence of the sample, including any labelled analyte, at that test zone. By subtracting the baseline level from the first and second signal levels, background noise may be removed. Preferably, first and second baseline levels are calculated and subtracted from the first and second signal levels respectively. Nevertheless, it is conceived that a single baseline level may be calculated only and subtracted from the first and second signal levels.
[0090] In the processing, the first and second signal levels can also be normalised. The first and second signal levels can be normalised, for example, based on their signal levels when the sample arrives at the first and second test zones and provides an initial signal level peak, or after the initial signal level peak when the sample arrives at the first and second test zones. The initial peak for each of the first and second signals may be substantially at the initial time point or very soon after the initial time point. The normalisation may be such that the levels of the initial peaks for the first and second signals are matched. One example of such normalisation is discussed further below, with reference to the graphs of
[0091] At 204, a change between the processed first and second signal levels over a period of time during the assay period, after the initial time point, is monitored, e.g., by the processor 123 of the reader 120. The monitoring of the change between the first and second signal levels may comprise monitoring a change in the difference between the first and second signal levels over the period of time. Differences between the signal levels may be calculated by subtracting one of the first and second signal levels from the other of the first and second levels, or by determining a ratio of the first and second signal levels. Differences between the signal levels may be calculated at one time point only, e.g. a single end point of testing (e.g. at the end of the assay period), or for different time points, e.g. at two or more time points during the assay period. The difference between the first and second signal levels at any time point may provide a delta (A) value or a ratio value (R). The monitoring of the change between the first and second signal levels may comprise monitoring a change (e.g. an evolution) of the delta value (A) or ratio value (R) over the period of time during the assay period. The change of the delta or ratio value may be quantified in some embodiments. Nevertheless, alternative approaches to quantifying the change between the first and second signal levels may be carried out, however, to obtain a test value or otherwise. For example, gradients of lines indicative of the progression of the first and second signal levels lines may be calculated. A change in relative gradient between the first and second signal level lines may be calculated. One example of how the change between the processed first and second signal levels is monitored over a period of time is again discussed further below, with reference to the graphs of
[0092] In this embodiment, prior to application to the receiving portion 111 of the lateral flow device 110, the sample is incubated to label any first analyte of interest present in the sample. Labelling can be carried out by incubating the sample with at least a first mobilisable capture reagent comprising detectable labels. During the incubation, the first mobilisable capture reagent may bind specifically to the first analyte of interest, if present in the sample, to form a plurality of first labelled complexes.
[0093] As illustrated in
[0094] When deposited in the vessel 102, the sample 101, the buffer solution 103 if present, and the first mobilisable capture reagent 104, can form a sample mixture 105 as represented generally in
[0095] As represented by a timer 106 in
[0096] While the vessel in
[0097] By incubating the sample mixture prior to application to the receiving portion 111 of the lateral flow device 110, the lateral flow device 110 may be absent of any conjugate release pad for labelling the sample. The incubation of the sample prior to the lateral flow process can be advantageous by providing for homogeneity in the distribution of labels in the sample, prior to the sample reaching the first and second test zones, as discussed in more detail below. Nevertheless, in alternative embodiments, different approaches to sample preparation, prior to the sample reaching the first and second test zones, may be employed, including through use of a conjugate release pad as part of the test device or otherwise.
[0098] In this embodiment, one of the first and second test zones 112a, 112b is configured to immobilize a plurality of the first labelled complexes, and the other of the first and second test zones 112a, 112b is configured so that it does not immobilize (or at least has a reduced ability to immobilize) the first labelled complexes. When the sample travels to each of the first and second test zones 112a, 112b, any first labelled complexes present in the sample provides for an increase in the first and second signals at the first and second test zones 112a, 112b. The first and second signals are generally indicative of the levels of the first labelled complexes at the first and second test zones, respectively, at any instant in time.
[0099] While either one of the first and second test zones 112a, 112 can be configured to immobilize a plurality of the first labelled complexes, in this embodiment, the second test zone 112b is configured to immobilize a plurality of the first labelled complexes. To immobilize the plurality of the first labelled complexes, the second test zone 112b comprises a first immobilised capture reagent being able to bind specifically to the first labelled complexes. In this embodiment, the first test zone 112a does not immobilize any first labelled complexes as it includes little or no capture reagents that are able to bind specifically to the first labelled complexes. In fact, in this embodiment, the first test zone 112a is substantially indistinct from immediately adjacent portions of the test device 110.
[0100] In the present embodiment, the labels are fluorescent labels, such as fluorescent labels comprising one or more fluorescent quantum dots. The fluorescent labels are configured to fluoresce at one or more specific wavelengths detectable by the photodetectors 121a, 121b. The fluorescent labels are caused to fluoresce, and therefore emit an emission light signal, upon excitation by an incident excitation light signal. In this embodiment, the excitation light is provided by first and second emission light sources such as first and second LEDs, 122a, 122b. By using fluorescent labels in the present embodiment, the levels of the first and second signals may be directly proportional to the levels of emission light detected at the first and second test zones by the photodetectors. Waveguides and/or optical filters may be located between the test zones 112a, 112b and the photodetectors and/or LEDs. In alternative embodiments, a single photodetector may be used to monitor emission light at the first and second test zones, e.g. to obtain first and second signals as a time-multiplexed signal.
[0101] The reader 120 of this or any other embodiment may be at least partly integrated with the lateral flow device 110, e.g. by being located, in combination with at least the test portion 112 of the lateral flow device 110, in a common housing. The housing may minimise any ambient light that may otherwise be detected by the photodetectors. Alternatively, all or part of the reader may be located in a separate device that is connectable to the lateral flow device. The separate device may be an electronic base unit. The electronic base unit may provide power to components of the reader whether the components of the reader are located in the base unit or elsewhere. The electronic base unit may comprise a port to receive the lateral flow device. The results of testing may be presented on a display that forms part of the reader and/or separate device.
[0102] By employing fluorescent labels, sensitivity gains may be achieved over more commonly deployed labels in assays, such as gold nanoparticles (colloidal gold). Nevertheless, gold nanoparticles or a variety of other labels such as coloured latex beads, magnetic particles, carbon nanoparticles, selenium nanoparticles, silver nanoparticles, up converting phosphors, organic fluorophores, textile dyes, enzymes, liposomes and others may also be used in embodiments of the present disclosure.
[0103] Example behaviours of first and second signal levels, processing of the first and second signal levels, and monitoring of changes between the first and second signal levels is now described with reference to the graphs of
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[0105] In this “peak clearance” method, rapid rehydration and release of the desiccated reagent, following the deposition of the sample, creates a high concentration of the labelled complexes in the leading edge of the fluid front. As seen in
[0106] As can be seen in
[0107]
[0108] At the first test zone, no immobilization of labelled complexes takes place. However, as evident from
[0109] Thus, in this “accretion method” example, according to the present disclosure, the first signal T1 can provide a base against which the second signal T2 can be more accurately compared. The comparison can be made at least at a period after the initial time point when the front of the sample arrives at the first and second time zones. In some embodiments, the comparison can be made at least at a first time point and at a second time point. By making a comparison at two different points in time, relative to at least the baseline signal, the degree of accretion of first labelled complexes at the second test zone can be more precisely monitored.
[0110] In general,
[0111] Referring to the flow chart of
[0112] In accordance with discussions above, prior to carrying out the comparing of the first and second signals, the first and second signals can be normalised to account for stray light and/or asymmetric efficiency at each test zone. Stray light can occur due to the excitation LEDs or ambient light ‘leaking’ to the photodetector(s), thus generating a constant background signal irrespectively of the presence of sample/fluorescent labels. Moreover, there may be a small misalignment of the optical components, tolerance stacks or deformation leading to asymmetric efficiency. In these respects, absolute measurement of fluorescent emissions from either of the test zones is not necessarily representative of the actual number of fluorescent labels immobilized or present at either one of the test zones. In the present disclosure, normalisation can be used to correct for imbalances between the first and second test zones. Prior to, or as part of the normalisation procedure, the first and second signal levels can be calibrated. In the calibration, raw measurements T1, T2 at the first and second test zones are corrected for their dry read measurements T1.sub.dry, T2.sub.dry that result from stray light or asymmetry. Thus, based on this correction, both the dry measurements can be reduced to zero. Moreover, in the normalisation procedure, signal levels, e.g. the peak signal levels T1.sub.peak, T2.sub.peak at the conjugate wavefront, as corrected based on the dry read measurements, are normalised to 1, 100 or another desirable number.
[0113] The importance of calibrating and normalising the first and second signal levels T1, T2 is further emphasised with reference to
[0114] The calibration and normalisation steps can enable more precise monitoring of the time evolution of the parameter delta (Δ) or ratio value (R), that indicates the difference in signal levels (strength) between T1 and T2. By measuring the parameter delta or ratio value at least at one time point after the initial time point, and sometimes at least at two or more time points, a correlation between the divergence in the post-peak phase to the accumulation of fluorescent labels at either test line, and thus the level of first the analyte present in the sample, can be made. It is recognised that the accumulation of labelled complexes at the test zones can be inferred by determining the parameter delta/ratio value at a single time point only, e.g. at an end time (t.sub.end) of the assay (e.g. 6 minutes from the arrival of the conjugate wavefront). However, by monitoring the time-evolution of the delta/ratio value at least at first and second time points (e.g. by comparing it at 3 and 6 minutes, for example) advantages can be achieved. The comparison can help compensate for simultaneous drift of the fluorescence intensity at the test line (e.g. non-specific binding), for example. In addition, it can enable an expansion of the dynamic range of the assay (e.g. linear response over multiple decades of analyte concentration). Moreover, it may allow for forecasting of an end result on the basis of which a test result may be considered positive.
[0115] In general, the comparing of the first and second signals may occur for one or more time points at least 10 seconds, at least 20 seconds, at least 30 seconds, at least 1 minute, at least 2 minutes, at least 3 minutes, at least 4 minutes, at least 5 minutes, at least 6 minutes, at least 8 minutes or at least 10 minutes after the initial time point or otherwise. When comparisons are made at least at first and second time points, the first time point may be at least 10 seconds, at least 20 seconds, at least 30 seconds, at least 1 minute, at least 2 minutes, at least 3 minutes, at least 4 minutes, at least 5 minutes, at least 6 minutes, at least 8 minutes or at least 10 minutes after the initial time point or otherwise. Moreover, the second time point may be after the first time point and at least 20 seconds, at least 30 seconds, at least 1 minute, at least 2 minutes, at least 3 minutes, at least 4 minutes, at least 5 minutes, at least 6 minutes, at least 8 minutes or at least 10 minutes after the initial time point or otherwise. Further, the second time point may be at least 10 seconds, at least 20 seconds, at least 30 seconds, at least 1 minute, at least 2 minutes, at least 3 minutes, at least 4 minutes, at least 5 minutes or at least 6 minutes after the first time point or otherwise.
[0116] In general, it will be understood that references herein to reading or comparisons of signals for, or at, one or more time points after an initial time point, or at specific times after the initial time point (e.g. at 3 minutes, or 6 minutes), etc., are intended to indicate a reading or comparison of the signals as they existed at those time points (subject to time-shifting to account for temporal lag, as discussed below). The actual comparing may be carried out substantially in real time, or at a later time, e.g., after signal data sets have been acquired for an entire assay period.
[0117] The computation of the parameter delta or ratio value, in addition to accounting for stray light and asymmetric efficiency at the first and second test zones, can take into account the sample having to travel further onto the test strip before reaching one of the test zones in comparison to the other of the test zones. For example, in the device 110 as illustrated in
[0118] An example process for calibration and normalisation of the first and second signals T1, T2, the correction for temporal lag to, and the monitoring of the time-evolution of the parameter delta Δ, is now described in more detail with reference to the flowchart of
[0119] At 601, an average of multiple dry readings for the T1 channel is computed to obtain T1.sub.dry.
[0120] Similarly, at 602, an average of multiple dry readings for the T2 channel is computed to obtain T2.sub.dry.
[0121] At 603, the first peak in the readings from the T1 channel is detected as a greater than threshold increase in the signal strength relative to T1.sub.dry, e.g., a ≥20% increase, to obtain T1.sub.peak. Any secondary peaks, caused to a delay in particle release can be discarded.
[0122] Similarly, at 604, the first peak in the readings from the T2 channel is detected as a greater than threshold increase in the signal strength relative to T2.sub.dry, e.g., a ≥20% increase, to obtain T2.sub.peak. Again, any secondary peaks, caused to a delay in particle release can be discarded.
[0123] Example graphical illustrations of T1.sub.dry, T2.sub.dry, T1.sub.peak, and T2.sub.peak are provided in
[0124] At 605, the number of read elements t.sub.Δ between and T1.sub.peak and T2.sub.peak is detected and, based on this number, the read elements of T.sub.1 and T.sub.2 are aligned. This alignment accounts for a temporal lag between the T1 and T2 channels, caused by the differing positions of the first and second test zones on the test strip. Through use of a temporal lag co-efficient n, which can be specific to the material used in the test device and the viscosity of the sample, the alignment can provide for a dynamic alignment of the T1 and T2 read elements over the entire assay period. This is represented in Equation 1a below, which assumes that the second test zone is further from the sample receiving portion than the first test zone. The co-efficient n may be a number other than 1, such as approximately 2, for example.
T2(i)=T2(i−nt.sub.Δ) Equation 1a
[0125] In alternative embodiments, however, a fixed time-shift of the T1 and T2 channels may be employed. This is represented in Equation 1b below, where N is an integer, and which again assumes that the second test zone is further from the sample receiving portion than the first test zone.
T2(i)=T2(i−N) Equation 1b
[0126] At 606, an average of signal strength for any read element j is obtained to obtain T1.sub.av. The averaging can take into account the signal strength for multiple preceding read elements, for example.
[0127] Similarly, at 607, an average of signal strength for any read element j is obtained to obtain T2.sub.av. The averaging can take into account the signal strength for multiple preceding read elements, for example.
[0128] Example graphical illustrations of T1.sub.av, T2.sub.av are provided in
[0129] At 608, calibration and normalisation in relation to the T1.sub.av values is carried out to obtain T1.sub.norm. In the normalisation procedure, the T1.sub.av values are normalised based on T1.sub.peak being adjusted to a normalisation value such as 1 or 100, following subtraction of the dry read measurement T1.sub.dry from both the T1.sub.av values and the peak value T1.sub.peak.
[0130] At 609, calibration and normalisation in relation to the T2.sub.av values is carried out to obtain T2.sub.norm. In the normalisation procedure, the T2.sub.av values are normalised based on T2.sub.peak being adjusted to the same normalisation value as used for T1.sub.av (e.g. 1 or 100), following subtraction of the dry read measurement T2.sub.dry from both the T2.sub.av values and the peak value T2.sub.peak.
[0131] Example graphical illustrations of T1.sub.norm and T2.sub.norm are provided in
[0132] At 610, a delta value Δi is computed at a first time point, t=t.sub.1 minutes, from detection of conjugate front at T1 (i.e. from the initial time point). t.sub.1 may be 3 minutes, for example. This delta value is indicative of the divergence in signal strength between the T1 and T2 channels at the first time point. In a negative test, where there is little or no immobilization of first labelled complexes at any test zone, it would be expected that the delta value Δi is very low or zero. In a positive test, where there is immobilization of first labelled complexes at one of the test zones but not the other, it would be expected that the delta value Δi is relatively substantial, as represented in
[0133] At 611, a delta value Δf is computed at a second time point, t=t.sub.2 minutes, from detection of conjugate front at T1. t.sub.1 may be 6 minutes, for example. This delta value is indicative of the divergence in signal strength between the T1 and T2 channels at the second time point. In a negative test, where there is little or no immobilization of first labelled complexes at any test zone, it would be expected that the delta value Δf is very low or zero. In a positive test, where there is immobilization of first labelled complexes at one of the test zones but not the other, it would be expected that the delta value Δf is relatively substantial and will have increased over the delta value Δi, as represented in
[0134] At 612, an S value is calculated by comparing Δi and Δf. Calculation of the S value is represented in Equation 2 below.
S=Δf−Δi Equation 2
[0135] A test value such as the S value (which may be positive or negative depending on which of the first and second test zones immobilizes the analyte of interest, for example) can be used to make a determination about a medical condition of a human or animal body from which the sample was received. For example, if the S value is within a nominal threshold range the determination of the medical condition can be assigned a negative test outcome (e.g. “no flu”). An S value that is exceeds the threshold (whether by being below a lower bound of the normal range or above a higher bound of the normal range) can be assigned as a positive test.
[0136] By eliminating the intrinsic variability of the conventional “peak clearance” approach exemplified in
[0137] Whilst qualitative detection of a biomarker is sufficient for certain illnesses (e.g. influenza), where the titre does not necessarily correlate with severity of the disease, antigen quantitation can be essential in some situations. One example is C-reactive protein, which is a nonspecific marker of inflammation and used to assess the onset of an infection.
[0138] The accretion method according to embodiments of the present disclosure can deliver higher sensitivity when directly compared with the conventional test assays based on peak clearance.
[0139] As described in further detail below, in some embodiments of the present disclosure, the methods and apparatus may be capable of making a determination about two or more different analytes of interest. The presence of either one of the two analytes of interest in the sample may be mutually exclusive of the presence of the other analyte of interest, or otherwise. So that the methods and apparatus can account for the presence of two or more analytes of interest, the sample may also be incubated with at least a second immobilised capture reagent comprising labels, wherein the second mobilisable capture reagent is able to bind specifically to the second analyte of interest in the sample to form a plurality of second labelled complexes. When determinations about two analytes of interest are made, two test zones may still be used. Where determinations about three of more analytes of interest are made, three or more test zones may be used in the lateral flow device.
[0140] Thus, the methods and apparatus of the present disclosure may make determinations about a plurality of different analytes in the sample and selectively indicate to the user the presence of one of a plurality of medical conditions, based on identification of one of the different analytes.
[0141] In one embodiment, as illustrated in the flowchart of
[0142] At 702, after the incubating is carried out, the sample (as a post-incubation mixture) is applied to a lateral flow device that includes first and second test zones, e.g. as illustrated in
[0143] In this embodiment, one of the first and second test zones is configured to immobilize a plurality of the first labelled complexes, but not the second labelled complexes, and the other of the first and second test zones is configured to immobilize a plurality of the second labelled complexes, but not the first labelled complexes.
[0144] At 703, after the initial time point when the front of the sample arrives at the first and second test zones, the first and second signals are compared to make a determination about both the first analyte of interest in the sample and the second analyte of interest in the sample. The comparison process can be identical to the process described above, with reference to
[0145] As discussed above, a ‘positive’ test (i.e. presence of the medical condition) can be identified if the S value exceeds a threshold value (S.sub.max). For example, where an S value is obtained at the endpoint of testing a positive test may be identified if S(t.sub.end)>S.sub.max. However, with reference to the decision making flow chart illustrated in
[0146] Any reader or processor used in the present disclosure may comprise one or more processors and data storage devices. The one or more processors may each comprise one or more processing modules and the one or more storage devices may each comprise one or more storage elements. The modules and storage elements may be at one site, e.g. in a single hand-held device, or distributed across multiple sites and interconnected by a communications network such as the internet.
[0147] The processing modules can be implemented by a computer program or program code comprising program instructions. The computer program instructions can include source code, object code, machine code or any other stored data that is operable to cause a processor to perform the methods described. The computer program can be written in any form of programming language, including compiled or interpreted languages and can be deployed in any form, including as a stand-alone program or as a module, component, subroutine or other unit suitable for use in a computing environment. The data storage device may include suitable computer readable media such as volatile (e.g. RAM) and/or non-volatile (e.g. ROM, disk) memory or otherwise.
[0148] The lateral flow device or lateral flow assay in accordance with one or more embodiments of the present disclosure may operate as a single unit. For example, the device or assay may be provided in the form of a hand-held device. The device or assay may be a single-use, disposable, device. Alternatively, the device or assay may be partly or entirely re-usable. While in some embodiments the device or assay may be implemented in a laboratory, the apparatus may designed as a ‘point-of-care’ device, for home use or use in a clinic, etc. The device or assay may provide a rapid-test device, with identification of target conditions being provided to the user relatively quickly, e.g., in under 10 minutes.
[0149] The apparatus of one or more embodiments of the present disclosure may be configured for use with a variety of different types of biological samples. The sample may be a fluid sample. Biological samples which may be used in accordance with the apparatus and/or method of one or more embodiments of the present disclosure include, for example, saliva, mucus, blood, serum, plasma, urine, vaginal discharge and/or amniotic fluid. A biological sample which may be used in accordance with the apparatus and/or method of one or more embodiments of the present disclosure is saliva, mucus or other respiratory aspirate.
[0150] The lateral flow device or assay of one or more embodiments of the present disclosure may be used in a method of determining whether or not a subject is infected with one or more pathogens e.g., Influenza virus. The methods may be carried out in a home environment or in a laboratory setting, or other environment. The methods may comprise using an apparatus of an embodiment as disclosed herein.
[0151] At least the first analyte may be one or more specific biological entities, such as one or more antigens. For example, the antigens may be from one or more respiratory or blood-borne viruses including, but not limited to, Influenza A (including the H1N1 virus subtype), Influenza B, Respiratory Synctial Virus, parainfluenza viruses, adenoviruses, rhinoviruses, coronaviruses, coxsackie viruses, HIV viruses, and/or enteroviruses. The apparatus and methods may also be used to test for sexually transmitted infections, such as bacterial infections known to spread by sexual contact (e.g., gonorrhoea, chlamydia or otherwise), and viral infections known to spread by sexual contact (e.g., herpes simplex viruses (HSV), papillomaviruses (HPV), human immunodeficiency virus (HIV), hepatitis B virus, and cytomegalovirus). In such examples, the antigens will be from one or more pathogens which cause the sexually transmitted infection or disease. Nonetheless, a wide variety of other medical conditions based on viruses, infections or otherwise may be tested using apparatus and methods according to the present disclosure.
[0152] The lateral flow assay or lateral flow device of one or more embodiments of the present disclosure may be provided in a kit. In one example, a kit may comprise the lateral flow assay or device of an embodiment of the present disclosure and instructions for use. The instructions for use may provide directions for using the assay or device to determine whether or not a subject is infected with one or more pathogens e.g., influenza virus, in accordance with a method of the present disclosure. In each of the examples, the kit may optionally comprise one or more incubation vessels configured for the particular diagnostic application of interest.
[0153] As described herein, the lateral flow device may be configured to include one or more capture reagents. Capture reagents used in accordance with one or more embodiments of the present disclosure may be any one or more agents having the capacity to bind an analyte of interest in a sample. The capture reagent may be configured to bind with specificity to a particular analyte. In accordance with one example, the capture reagents may have the capacity to bind with specificity to a virus antigen to form a binding pair or complex. However, the device may be configured to include capture reagents having the capacity to bind, and form a binding pair or complex with, antigens from other infectious pathogens as required for the particular diagnostic application. Some examples of such binding pairs or complexes include, but are not limited to, an antibody and an antigen (wherein the antigen may be, for example, a peptide sequence or a protein sequence); complementary nucleotide or peptide sequences; polymeric acids and bases; dyes and protein binders; peptides and protein binders; enzymes and cofactors, and ligand and receptor molecules, wherein the term receptor refers to any compound or composition capable of recognising a particular molecule configuration, such as an epitopic or determinant site.
[0154] The term “immobilised”, as used with respect to a capture reagent, means the reagent is attached to one of the test zones of the lateral flow device such that lateral flow of the sample through or along the absorbent pad material of the lateral flow device during an assay process will not dislodge the reagent. The capture reagent may be immobilised by any suitable means known in the art. Conversely, the terms “mobilisable” is used to indicate that the capture reagent is capable of moving with the sample, either by itself or as part of a complex comprising the capture reagent and cognate analyte, through the lateral flow device from at least the receiving portion to the test portion, and as an example, a capture reagent which binds specifically to an influenza A virus antigen may not bind significantly or at all to any other analytes or components in a sample, such as an influenza B virus antigen, if present in the sample.
[0155] In accordance with one particular example, the or each capture reagent is an antibody or an antigen binding portion thereof. The skilled person will be aware that an “antibody” is generally considered to be a protein that comprises a variable region made up of a plurality of immunoglobulin chains, e.g., a polypeptide comprising a V.sub.L and a polypeptide comprising a V.sub.H. An antibody also generally comprises constant domains, some of which can be arranged into a constant region or constant fragment or fragment crystallizable (Fc). A V.sub.H and a V.sub.L interact to form a Fv comprising an antigen binding region that is capable of specifically binding to one or a few closely related antigens. Generally, a light chain from mammals is either a κ light chain or a λ light chain and a heavy chain from mammals is α, δ, ε, γ, or μ. Antibodies can be of any type (e.g., IgG, IgE, IgM, IgD, IgA, and IgY), class (e.g., IgG1, IgG2, IgG3, IgG4, IgA.sub.1 and IgA.sub.2) or subclass. The term “antibody” also encompasses humanized antibodies, human antibodies and chimeric antibodies. As used herein, the term “antibody” is also intended to include formats other than full-length, intact or whole antibody molecules, such as Fab, F(ab′)2, and Fv which are capable of binding the epitopic determinant. These formats may be referred to as antibody “fragments”. In accordance with one or more embodiments in which the device 110 of the disclosure includes an antibody fragment configured to detect an influenza virus antigen, it will be expected that antibody fragments retain some or all of the ability of the corresponding full-length, intact or whole antibody to bind to the influenza virus antigen, as required. Examples of antibody fragment formats which retain binding capability include, but are not limited to, the following:
(1) Fab, the fragment which contains a monovalent binding fragment of an antibody molecule and which can be produced by digestion of whole antibody with the enzyme papain to yield an intact light chain and a portion of one heavy chain;
(2) Fab′, the fragment of an antibody molecule which can be obtained by treating whole antibody with pepsin, followed by reduction, to yield an intact light chain and a portion of the heavy chain; two Fab′ fragments are obtained per antibody molecule;
(3) (Fab′).sub.2, the fragment of the antibody that can be obtained by treating whole antibody with the enzyme pepsin without subsequent reduction; F(ab′).sub.2 is a dimer of two Fab′ fragments held together by two disulfide bonds;
(4) Fv, defined as a genetically engineered fragment containing the variable region of the light chain and the variable region of the heavy chain expressed as two chains;
(5) Single chain antibody (“SCA”), defined as a genetically engineered molecule containing the variable region of the light chain, the variable region of the heavy chain, linked by a suitable polypeptide linker as a genetically fused single chain molecule; such single chain antibodies may be in the form of multimers such as diabodies, triabodies, and tetrabodies etc which may or may not be polyspecific (see, for example, WO 94/07921 and WO 98/44001); and
(6) Single domain antibody, typically a variable heavy domain devoid of a light chain.
[0156] Accordingly, an antibody used as a capture reagent in accordance with one or more embodiments of the present disclosure may include separate heavy chains, light chains, Fab, Fab′, F(ab′).sub.2, Fc, a variable light domain devoid of any heavy chain, a variable heavy domain devoid of a light chain and Fv. Such fragments can be produced by recombinant DNA techniques, or by enzymatic or chemical separation of intact immunoglobulins.
[0157] The terms “full-length antibody,” “intact antibody” or “whole antibody” are used interchangeably to refer to an antibody in its substantially intact form, as opposed to an antigen binding fragment of an antibody. Specifically, whole antibodies include those with heavy and light chains including a Fc region. The constant domains may be wild-type sequence constant domains (e.g., human wild-type sequence constant domains) or amino acid sequence variants thereof. In some cases, the intact antibody may have one or more effector functions.
[0158] An antibody used as a capture reagent in accordance with one or more embodiments of the present disclosure may be a humanized antibody. The term “humanized antibody”, as used herein, refers to an antibody derived from a non-human antibody, typically murine, that retains or substantially retains the antigen-binding properties of the parent antibody but which is less immunogenic in humans.
[0159] It will be appreciated by persons skilled in the art that numerous variations and/or modifications may be made to the above-described embodiments, without departing from the broad general scope of the present disclosure. The present embodiments are, therefore, to be considered in all respects as illustrative and not restrictive.