DETECTION SYSTEM AND METHOD FOR PRODUCING SAME
20210114023 · 2021-04-22
Assignee
Inventors
- Mario EL KHOURY (Darmstadt, DE)
- Wolfgang ENSINGER (Münster-Altheim, DE)
- H. Ulrich GÖRINGER (Roßdorf, DE)
- Sebastian QUEDNAU (Darmstadt, DE)
- Ivana DUZNOVIC (Mainz, DE)
- Helmut F. SCHLAAK (Ober-Ramstadt, DE)
Cpc classification
B01L2200/12
PERFORMING OPERATIONS; TRANSPORTING
B01L3/502707
PERFORMING OPERATIONS; TRANSPORTING
G01N33/48721
PHYSICS
G01N15/0656
PHYSICS
B01L3/50273
PERFORMING OPERATIONS; TRANSPORTING
B81C1/00119
PERFORMING OPERATIONS; TRANSPORTING
G01N27/44739
PHYSICS
G01N33/543
PHYSICS
B81C1/00206
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/0816
PERFORMING OPERATIONS; TRANSPORTING
B81B1/006
PERFORMING OPERATIONS; TRANSPORTING
B01L2400/0415
PERFORMING OPERATIONS; TRANSPORTING
International classification
B01L3/00
PERFORMING OPERATIONS; TRANSPORTING
B81B1/00
PERFORMING OPERATIONS; TRANSPORTING
B81C1/00
PERFORMING OPERATIONS; TRANSPORTING
G01N33/543
PHYSICS
Abstract
A method for producing a detection system for biomolecules in a medium involves providing a first detector section having a first channel region and a second detector section having a second channel region. A membrane having at least one pore is provided and the first detector section and the second detector section are arranged on opposite sides of the membrane, such that at least part of the first channel region and the second channel region are separated by the membrane and the first channel region and the second channel region are connected to each another to form a channel system, in order to form a flow path for the medium through the at least one pore of the membrane. Along the flow path, through the membrane, bioreceptors are bound and/or coupled to the membrane in order to determine a concentration of the biomolecules in the medium by means of a measurement of the flow along the flow path.
Claims
1-15. (canceled)
16. A method for producing a detection system for biomolecules in a medium, the method comprising: providing a first detector section with a first channel region and a second detector section with a second channel region; providing a membrane with at least one pore; arranging the first detector section and the second detector section on opposite sides of the membrane, so that at least part of the first channel region and the second channel region are separated by the membrane and the first channel region and the second channel region are connected to each another to form a channel system in order to form a flow path for the medium through the at least one pore of the membrane; and bioreceptors are arranged on the membrane along the flow path through the membrane, wherein the bioreceptors are configured to determine a concentration of the biomolecules in the medium by measuring the flow along the flow path.
17. The method of claim 16, wherein the arranging step comprises: arranging the membrane on the first detector section or on the second detector section; and then removing part of the membrane outside a detection region.
18. The method of claim 16, further comprising: forming an adhesive layer in contact with the membrane, the adhesive layer being brought into contact with the membrane in such a way that at least some of the pores are closed by the adhesive layer, thereby increasing a sensitivity of the membrane by reducing a number of pores for the flow measurement of the medium.
19. The method of claim 16, further comprising: attaching the bioreceptors to the membrane by a functionalization, the functionalization being performed before or after the arrangement of the first detector section and the second detector section on opposite sides of the membrane.
20. The method of claim 19, wherein the functionalization comprises at least the following functionalization steps: activating a carboxy end group to obtain an amine-reactive intermediate; and amidizing the amine-reactive intermediate to form desired bioreceptors on the membrane, wherein the functionalization occurs in a same way in all areas of the membrane or, during the functionalization, different bioreceptors are formed in the pores in the different regions, so that the membrane becomes sensitive to different biomolecules.
21. The method of claim 16, further comprising: laminating the membrane on the first detector section and/or on the second detector section.
22. The method of claim 16, wherein the first detector section and the second detector section are connected to each other with the opposite sides of the membrane by a thermal treatment at a temperature of at least 50° C. or at least 65° C.
23. The method of claim 16, wherein a concentration of the biomolecules in the medium is determined by at least one of the following measurements: (i) a flow measurement through the at least one pore; (ii) an impedance measurement; and (iii) an electrophoresis or an electroosmosis measurement.
24. The method of claim 16, wherein the biomolecules comprise prostate-specific antigens (PSA) and the bioreceptors comprise aptamers, which are one of the following aptamers: TABLE-US-00006 d) (SEQ ID NO: 1) NH.sub.2-C.sub.6-CCGUCAGGUCACGGCAGCGAAGCUCUAGGCGCGGCCAGUUGC- OH; e) (SEQ ID NO: 2) NH.sub.2-C.sub.6-TTTTTAATTAAAGCTCGCCATCAAATAGCTTT-OH; f) (SEQ ID NO: 3) NH.sub.2-C.sub.6-ACGCTCGGATGCCACTACAGGTTGGGGTCGGGCATGCGTCCGG AGAAGGGCAAACGAGAGGTCACCAGCACGTCCATGAG-OH.
25. A detection system for biomolecules in a medium, the detection system comprising: a first channel region and a second channel region into which the medium can be introduced and which have a first electrode and a second electrode; a membrane, which comprises at least one pore, separates the first channel region from the second channel region, and is arranged fluidly between the first electrode and the second electrode, wherein bioreceptors are formed on or in the pore and include one of the following aptamers TABLE-US-00007 (iv) (SEQ ID NO: 1) NH.sub.2-C.sub.6-CCGUCAGGUCACGGCAGCGAAGCUCUAGGCGCGGCCAGUUGC- OH; (v) (SEQ ID NO: 2) NH.sub.2-C.sub.6-TTTTTAATTAAAGCTCGCCATCAAATAGCTTT-OH; (vi) (SEQ ID NO: 3) NH.sub.2-C.sub.6-ACGCTCGGATGCCACTACAGGTTGGGGTCGGGCATGCGTCCGG AGAAGGGCAAACGAGAGGTCACCAGCACGTCCATGAG-OH, so that a PSA concentration in the medium can be measured via a resistance measurement along a flow path for the medium between the first electrode and the second electrode.
26. The detection system according to claim 25, wherein the at least one pore in the membrane has a tapered or cylindrical profile along the flow path.
27. The detection system of claim 25, wherein the membrane in different areas comprises different receptors or aptamers to enable simultaneous detection of different biomolecules.
28. The detection system of claim 25, wherein the first channel region and/or the second channel region has a maximum channel width of at most 10 microns perpendicular to the flow path.
29. The detection system of claim 25, further comprising: an electrolyte inlet at the second electrode and an analyte inlet at the first electrode in order to be able to introduce the medium in the analyte inlet and an electrolyte into the electrolyte inlet, in order to reduce the amount of medium required for detection.
30. A method of using a detection system to detect biomolecules, the detection system comprising a first channel region and a second channel region into which the medium can be introduced and which have a first electrode and a second electrode; a membrane, which comprises at least one pore, separates the first channel region from the second channel region, and is arranged fluidly between the first electrode and the second electrode, wherein bioreceptors are formed on or in the pore and include one of the following aptamers TABLE-US-00008 (i) (SEQ ID NO: 1) NH.sub.2-C.sub.6-CCGUCAGGUCACGGCAGCGAAGCUCUAGGCGCGGCCAGUUGC- OH; (ii) (SEQ ID NO: 2) NH.sub.2-C.sub.6-TTTTTAATTAAAGCTCGCCATCAAATAGCTTT-OH; (iii) (SEQ ID NO: 3) NH.sub.2-C.sub.6-ACGCTCGGATGCCACTACAGGTTGGGGTCGGGCATGCGTCCGG AGAAGGGCAAACGAGAGGTCACCAGCACGTCCATGAG-OH, so that a PSA concentration in the medium can be measured via a resistance measurement along a flow path for the medium between the first electrode and the second electrode, the method comprising: detecting the biomolecules in a medium by measuring an electrical variable, which is a function of an electrical resistance between the first electrode and the second electrode.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0033] The exemplary embodiments of the present invention will be better understood from the following detailed description and the accompanying drawings of the different embodiments, which should not be construed as limiting the disclosure to the specific exemplary embodiments but are for explanation and understanding only.
[0034]
[0035]
[0036]
[0037]
[0038]
[0039]
[0040]
DETAILED DESCRIPTION
[0041]
[0042] Providing S110 a first detector section having a first channel region and a second detector section having a second channel region;
[0043] Providing S120 a membrane having at least one pore; and
[0044] Arranging S130 the first detector section and the second detector section on opposite sides of the membrane, such that at least part of the first channel region and the second channel region are separated by the membrane and the first channel region and the second channel region are connected to each another to form a channel system to form a flow path for the medium through the at least one pore of the membrane.
[0045] It is understood that this list does not imply any order. The production steps mentioned can be carried out independently of one another or in parallel. The membrane bioreceptors are formed on the membrane along the flow path in order to determine a concentration of the biomolecules in the medium by measuring the flow (for example the resistance) along the flow path.
[0046]
[0047] A cross-sectional view through the pore 110 is shown on the left-hand side of
[0048]
[0049] The detection system comprises in detail a first channel region 215 and a second channel region 225 with the membrane 120 arranged between them (see
[0050] The medium 50 contains ions (for example as part of the electrolyte) and the biomolecules 114 to be detected, which can also be ions (but need not be). There is also a first electrode 315 in the first channel region of 215 and a second electrode 325 in the second channel region 225. By applying the voltage U between the first electrode 315 and the second electrode 325, a current I flows through the nanochannel 110 (see
[0051] The change in electrical resistance can be determined by measuring the current voltage. The corresponding characteristic is shown in
[0052] As mentioned at the beginning, a corresponding functionalization of the membrane is required, in which corresponding bioreceptors 112 are attached within the pore 110, so that the membrane is highly sensitive to certain molecules to be detected. The pore(s) themselves can also be created during the functionalization.
[0053]
[0054] The surface properties can be adjusted by covalent linkage with different receptor molecules 112, such as nucleic acid aptamers (DNA/RNA). According to Ali et al. (Ali M, Nasir S, Ensinger W. 2015. Bioconjugation-induced ionic current rectification in aptamer-modified single cylindrical nanopores. Chem Commun 51: 3454-3459) the coupling can be carried out in a two-step reaction using 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC) and sulfo-NHS (N-hydroxysulfosuccinimide). The reaction mechanism of linking a biological receptor 112 (e.g. an aptamer) with carboxylic acid/carboxylate groups located on the surface by EDC/NHS coupling chemistry can be realized as follows:
##STR00001##
[0055] According to exemplary embodiments of the present invention, the reaction takes place in the microfluidic system, the construction and production of which is explained in more detail below.
[0056] First step (activation): Here the carboxy end groups are activated by the esterification of NHS using EDC. An O-acylated urea intermediate is initially formed, which is converted into an amine-reactive NHS ester. For this purpose, the membrane 120 is integrated into the microfluidic system. The system is then filled with a freshly prepared aqueous solution (pH 7) of 0.2 mM EDC and 0.4 mM NHS. The activation of the surface of the pores 110 is completed after one hour.
[0057] Second step (amidization): This is where the functionalization takes place with the receptor molecules 112 (aptamers), the chemical structure of which contains at least one primary amino group (—NH2). This amino group reacts with the activated carboxylic acid ester at room temperature to form an amide bond (—(C═O)—NH—). For this purpose, the microfluidic system is filled with a 0.1 mM aqueous solution of the receptor molecule 112 (aptamer) and left to stand overnight.
[0058] Successful functionalization is verified by measuring a current-voltage characteristic, since unfunctionalized and functionalized pores 110 differ at the same potential by different current strengths. This sensory principle has already been explained with
The following molecules are to be used as PSA-specific aptamers as bioreceptors 112: [0059] 1. RNA Aptamer (reference: Jeong S, Han S R, Lee Y J, Lee S W. 2010. Selection of RNA aptamers specific to active prostate-specific antigen. Biotechnol Lett 32: 379-385) Sequence (5′-3′):
TABLE-US-00003 NH.sub.2-C.sub.6-CCGUCAGGUCACGGCAGCGAAGCUCUAGGCGCGGCCAGUUGC- OH [0060] 2. DNA Aptamer-01 (reference: Savory N, Abe K, Sode K, Ikebukuro K. 2010. Selection of DNA aptamer against prostate specific antigen using a genetic algorithm and application to sensing. Biosens Bioelectron 26: 1386-1391) Sequence (5′-3′):
TABLE-US-00004 NH.sub.2-C.sub.6-TTTTTAATTAAAGCTCGCCATCAAATAGCTTT-OH [0061] 3. DNA Aptamer-02 (reference: Duan M, Long Y, Yang C, Wu X, Sun Y, Li J, Hu X, Lin W, Han D, Zhao Y, Liu J, Ye M, Tan W. 2016. Selection and characterization of DNA aptamer for metastatic prostate cancer recognition and tissue imaging. On-cotarget 7: 36436-36446) Sequence (5′-3′):
TABLE-US-00005 NH.sub.2-C.sub.6-ACGCTCGGATGCCACTACAGGTTGGGGTCGGGCATGCGTCCGG AGAAGGGCAAACGAGAGGTCACCAGCACGTCCATGAG-OH
[0062] The sensory properties of the functionalized (single-pore) plastic films 120 can be examined in a macro cell. For this purpose, the exemplary single-pore plastic films 120 can be used, which are manually clamped between two liquid chambers 215, 225 before each examination. The advantageous single-pore plastic films 120 are difficult to produce. In contrast, multipore plastic films can be mass-produced. However, they have a lower sensitivity compared to the individual pores.
[0063] In order to combine the advantages of both films, the wetting area of the multipore film 120 is reduced to such an extent that a single pore is still in contact with the liquid. This takes place through integration into a microsystem and thus enables the use of the detection system by untrained users.
[0064]
[0065] In the microfluidic system of
[0066] The second detector region 500B is shown enlarged on the right-hand side of
[0067] The membrane 120 is designed, for example, horizontally and the analyte flow from one of the analyte inlets 530 takes place, for example, in the vertical direction through the membrane 120 to the channel 521, which leads to the electrolyte inlet 520. This flow can be generated either vertically downwards or vertically upwards by an applied voltage to the corresponding electrodes. The mode of operation of the detection system is illustrated further below by the representation of the production. Since there are several analyte inlets 530, different measurements can be carried out in parallel or in succession (for example for different biomolecules 114). In this way, the different analyte inlets 530 can be led to different regions of the membrane 120, which are functionalized differently, so as to allow an analysis for different biomolecules 114 in parallel.
[0068]
[0069]
[0070]
[0071] The electrode structure produced in this way can also be seen in
[0072]
[0073] In
[0074] In the production step from
[0075] In the subsequent production step from
[0076] The result is shown in the spatial representation in
[0077] In
[0078] In the following step (see
[0079] If the membrane 120 is applied over the entire area to the structures of
[0080] The channel regions 215, 225 shown in
[0081] According to exemplary embodiments, the above-described functionalization of the membrane 120 takes place (for example during the production step from
[0082]
[0083] The exemplary embodiment in
[0084] As described with
[0085] In addition, the first electrode 315 and the second electrode 325 are formed on the substrate 610a of the first detector section 210 (see
[0086] The exemplary embodiment of
[0087] Thus, in the exemplary embodiment in
[0088] Advantageous aspects of exemplary embodiments of the present invention relate in particular to the following: [0089] The large-/full-surface pore plastic film 120 is integrated in a lab-on-chip system between two fluid channels 215, 225 (for example in a batch process). [0090] The film 120 is removed in the region of the fluid channels 215, 225 by laser cutting, xurography or etching (see
[0094] Functionalization after chip production has the following advantages over pre-functionalized pores: [0095] Only small amounts of receptor molecules 112 are required for the functionalization of the multipore plastic films 120 after the integration. [0096] By integrating previously functionalized pores, it is possible to contaminate or clog pores.
[0097] Exemplary embodiments also offer the following advantages: [0098] The new system has the potential to be expanded to a Micro Total Analysis System (μTAS). This enables the simultaneous detection of several ligand molecules 114. [0099] The sensitivity of the microsystem is comparable to the single-pore measurements. [0100] A conventional adhesive layer is a liquid UV adhesive. This leads to the clogging of the pores and is therefore not suitable for the integration of pores or functionalized pores. With the help of these conventional methods, the impermeability of the system cannot be ensured. The functionalization of the film can also be destroyed by UV exposure. In contrast to this, in exemplary embodiments of the invention, the multipore plastic film 120 is thermally integrated (at T=65° C.). [0101] The multipore plastic films used can be functionalized both after and before integration. A yield of 100% was achieved with this method.
[0102] A channel width of 50 microns can be used, which corresponds to a wetting area of 2,500 μm.sup.2. The wetting area can be further reduced to 100 μm.sup.2. In conventional processes, only a wetting area of 31,416 μm.sup.2 has been achieved.
[0103] The functional principle described so far is based on a voltametric method. Other measuring principles are used in further exemplary embodiments. These are for example:
[0104] (i) Flow measurement through the pore 110;
[0105] (ii) Impedance measurements; and
[0106] (iii) Electrokinetic measurements (electrophoresis, electroosmosis, etc.).
[0107] Ultimately, however, these measuring principles also measure a resistance which impedes the flow of the biomolecules 114 through the pore 110. Only the measured variable changes: in (i) the flow velocity of the medium 50; in (ii) an electrical impedance; in (iii) an electrokinematic quantity.
[0108] In comparison to current methods, which detect the respective analyte/ligand molecules in a complex manner, exemplary embodiments of the present invention enable a concentration measurement with higher selectivity and sensitivity compared to the analysis methods currently available. Different ligands in biotic and abiotic systems can be detected with this. These include the following groups of organisms and their components:
[0109] Low molecular weight organic and inorganic compounds of any kind
[0110] Environmental toxins
[0111] Agrochemicals
[0112] Hormones
[0113] Proteins
[0114] Antibiotics
[0115] Neurotoxins
[0116] Bacteria
[0117] Viruses
[0118] Parasites
[0119] The integration of the nanosensors into a mass-producible lab-on-chip system is made possible by this invention, which can be used as a compact, portable analysis system for the above-mentioned applications. This enables the measurement to be carried out within a few minutes, which can be life-saving in selected cases. The detection system can be used as a single-use microfluidic system so that it is used once for each individual test. The system can therefore be produced in large numbers.
[0120] The features of the invention disclosed in the description, the claims and the figures may be essential for the realization of the invention either individually or in any combination.
[0121] Although the invention has been illustrated and described in detail by way of preferred embodiments, the invention is not limited by the examples disclosed, and other variations can be derived from these by the person skilled in the art without leaving the scope of the invention. It is therefore clear that there is a plurality of possible variations. It is also clear that embodiments stated by way of example are only really examples that are not to be seen as limiting the scope, application possibilities or configuration of the invention in any way. In fact, the preceding description and the description of the figures enable the person skilled in the art to implement the exemplary embodiments in concrete manner, wherein, with the knowledge of the disclosed inventive concept, the person skilled in the art is able to undertake various changes, for example, with regard to the functioning or arrangement of individual elements stated in an exemplary embodiment without leaving the scope of the invention, which is defined by the claims and their legal equivalents, such as further explanations in the description.
LIST OF REFERENCE SIGNS
[0122] 50 Medium [0123] 110 Pore [0124] 112 Bioreceptors [0125] 114 Biomolecules [0126] 120 Membrane [0127] 125 Detection range [0128] 130 Flow path [0129] 210, 220 Detector sections [0130] 215, 225 Channel regions [0131] 310, 320 Voltage characteristics [0132] 315 First electrode [0133] 325 Second electrode [0134] 500A, 500B Detector areas [0135] 510 Connection electrodes [0136] 520 Electrolyte inlet [0137] 521 Channel [0138] 530 Analyte inlets [0139] 610 Substrate [0140] 620 Photoresist layer [0141] 630 Intermediate layer (e.g. made of chrome) [0142] 640 Electrode layer (e.g. made of silver or gold) [0143] 660 Adhesive medium layer [0144] 670 Mask layer [0145] 680 Adhesive layer