CARTRIDGE, ELECTROWETTING SAMPLE PROCESSING SYSTEM AND DROPLET FORMATION
20230003685 · 2023-01-05
Assignee
Inventors
- Patrick KINNEY (Hayward, CA, US)
- Tin Ngo (San Jose, CA, US)
- Sujata Iyer (San Jose, CA, US)
- Daniel Hoffmeyer (San Jose, CA, US)
- Manjeet Dhindsa (San Jose, CA, US)
- Tiffany Ding (Lay) (San Jose, CA, US)
Cpc classification
B01L3/502792
PERFORMING OPERATIONS; TRANSPORTING
G01N27/44739
PHYSICS
B01L3/502715
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/0816
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/161
PERFORMING OPERATIONS; TRANSPORTING
International classification
Abstract
A cartridge for use in an electrowetting sample processing system, the cartridge having at least one inlet port for introducing an input liquid in an internal gap of the cartridge, wherein the gap has at least one hydrophobic surface and is configured to provide an electrowetting induced movement of a microfluidic droplet of input liquid, wherein the input liquid has a carrier liquid and a processing liquid and the gap has a capture zone that is configured to capture at least a part of the processing liquid as a microfluidic droplet by use of electrowetting force and the gap further has a transfer zone that is configured to provide a passage for the carrier liquid next to the microfluidic droplet, while processing liquid is captured in the capture zone.
Claims
1. A method for operating a cartridge in an electrowetting sample processing system, the cartridge comprising an inlet port and an internal gap that comprises at least one hydrophobic surface, a capture zone and a transfer zone and that is configured to provide an electrowetting induced droplet movement, the method comprising: introducing an input liquid into the internal gap of the disposable cartridge via the input port, the input liquid comprising a carrier liquid and a processing liquid and the introduction of the input liquid is accomplished by sequentially and/or alternatingly feeding the processing liquid and the carrier liquid; and capturing in the capture zone at least a part of the processing liquid as a microfluidic droplet by use of electrowetting force and providing a passage for the carrier liquid next to the microfluidic droplet, while the processing liquid is captured in the capture zone.
2. A method for operating a cartridge that comprises an inlet port and an internal gap with a capture zone and a transfer zone, the method comprising: providing an input liquid that comprises a processing liquid and a carrier liquid and the providing of the input liquid is accomplished by sequentially and/or alternatingly feeding the processing liquid and the carrier liquid; separating at least a part of the processing liquid in the capture zone by use of electrowetting force; transferring the carrier liquid from the inlet port to the gap via the transfer zone, while the processing liquid is captured in the capture zone; and capturing at least a part of the processing liquid in the capture zone for providing a microfluidic droplet that is movable by applying an electrowetting force to the microfluidic droplet.
3. The method according to claim 1, wherein the input liquid comprises multiple liquid parts, in particular parts of different compositions, and the capturing is accomplished by accumulating these parts for providing the microfluidic droplet.
4. The method according to claim 3, wherein the input liquid comprises at least one part that comprises a volume that is insufficient for a transportation by electrowetting and/or that comprises a volume of less than 2 μl, in particular less than 1.5 μl.
5. The method according to claim 1, comprising sequentially actuating electrodes for inducing a motion of the microfluidic droplets away from the capture zone, thereby enabling a following part of the processing liquid to be captured.
6. A method for operating a sample processing system comprising a cartridge with an inlet port and an internal gap that comprises at least one hydrophobic surface, a capture zone and a transfer zone and that is configured to provide an electrowetting induced droplet movement, the method comprising: introducing an input liquid into the internal gap of the disposable cartridge via the input port, the input liquid comprising a carrier liquid and a processing liquid and the introducing of the input liquid is accomplished by sequentially and/or alternatingly feeding the processing liquid and the carrier liquid; and capturing in the capture zone at least a part of the processing liquid as a microfluidic droplet by use of electrowetting force and providing a passage for the carrier liquid next to the microfluidic droplet, while the processing liquid is captured in the capture zone.
7. The method according to claim 1, wherein the carrier liquid that is a filler liquid, in particular an electrowetting filler liquid, further in particular a silicone oil.
8. The method according to claim 1, wherein the processing liquid comprises at least one of: a reagent liquid, a buffer a diluent an extraction liquid a washing liquid a suspension, which in particular is a suspension of magnetic beads, single cells or cell aggregates.
9. The method according to claim 1, the cartridge comprising at least an electrode array for applying an electrowetting force to the to the processing liquid and/or the microfluidic droplet.
10. The method according to claim 1, the cartridge comprising a first part with the inlet port and a second part attached to the first part, such that the gap is formed between the first part and the second part.
11. The method according to claim 1, wherein the method uses a liquid feeder that is operatively connected to the inlet port by a tube and feeding the input liquid of a predetermined volume to the inlet port.
12. The method according to claim 11, wherein the method uses a controller for operating the liquid feeder, in particular a droplet generator, independently and/or asynchronously from the operation of electrodes used for electrowetting.
13. The method according to claim 1, wherein the method uses a detector for monitoring the feed of the input liquid, in particular the processing liquid and/or the carrier liquid.
14. The method according to claim 1, wherein the transfer zone is provided by an open space, which is located between the inlet port and the top of the microfluidic droplet captured in the capture zone.
15. The method according to claim 1, wherein the method provides at least one capture zone or at least one capture electrode that is located closest to the inlet port such that the area of the capture zone covers between 5% and 95% of the opening area of the inlet port.
16. The method according to claim 1, wherein the area of the capture electrode covers between 10% and 90% of the opening area of the inlet port or between 25% and 75% of the opening area of the inlet port.
17. The method according to claim 1, wherein the method comprises capturing or to accumulating a microfluidic droplet of less than 10 μl in volume.
18. The method according to claim 1, wherein the inlet port comprises a sealing surface for a tube to be inserted into the inlet port, wherein in particular the inlet port is funnel-shaped with an enlarged opening towards the tube to be inserted.
19. The method according to claim 1, wherein at least one electrode comprises at least one capture electrode that is configured to capture at least a part of the processing liquid as a microfluidic droplet by use of electrowetting force, wherein in particular the edge of the capture electrode is arranged with an offset from the axis of flow of the inlet port, further in particular with an offset of at least a quarter or at least half of a largest diameter of the capture electrode.
20. The method according to claim 1, wherein the at least one electrode comprises a transport electrode for removing the microfluidic droplet from the capture zone.
21. The method according to claim 1, wherein the cartridge is a disposable cartridge.
22. The method according to claim 1, wherein sample processing system is a biological sample processing system.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0065] Embodiments of the current invention are described in more detail in the following with reference to the figures. These are for illustrative purposes only and are not to be construed as limiting. It shows
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DETAILED DESCRIPTION OF THE INVENTION
[0079] The
[0080] The digital microfluidics system 1 comprises a base unit 7 with at least one cartridge accommodation site 8 that is configured for taking up a disposable cartridge 2. The digital microfluidics system 1 can be a standalone and immobile unit, on which a number of operators are working with cartridges 2 that they bring along. The digital microfluidics system 1 thus may comprise a number of cartridge accommodation sites 8 and a number of electrode arrays 9 at least some of which are located on electrode boards 41.
[0081] It may be preferred to integrate the digital microfluidics system 1 into a liquid handling workstation or into a Freedom EVO® robotic workstation, so that a pipetting robot can be utilized to transfer liquid portions and/or sample containing liquids to and from the cartridges 2.
[0082] Alternatively, the system 1 can be can be configured as a hand-held unit which only comprises and is able to work with a low number, e.g. a single disposable cartridge 2. Every person of skill will understand that intermediate solutions that are situated in-between the two extremes just mentioned will also operate and work within the gist of the present invention.
[0083] According to the present invention, the digital microfluidics system 1 also comprises at least one board accommodation site 40 for taking up an electrode board 41 which comprises an electrode array 9 that substantially extends in a first plane and that comprises a number of electrodes 10. Such an electrode board 41 preferably is located at each one of said cartridge accommodation sites 8 of the base unit 7. Preferably each electrode array 9 is supported by a bottom substrate 11. It is noted that the expressions “electrode array”, “electrode layout”, and “printed circuit board (PCB)” are utilized herein as synonyms.
[0084] The digital microfluidics system 1 may also comprise at least one cover plate 12 with a top substrate; though providing of such cover plates 12 is particularly preferred, at least some of the cover plates may be dispensed with or may be replaced by an alternative cover for holding a disposable cartridge 2 in place inside the base unit of the microfluidics system 1. Thus, at least one cover plate 12 may be located at one of said cartridge accommodation sites 8. The cover plate 12 and the bottom substrate 11 with the electrode array 9 or PCB define a space or cartridge accommodation site 8 respectively. In a first variant (see the two cartridge accommodation sites 8 in the middle of the base unit 7, the cartridge accommodation sites 8 are configured for receiving a slidingly inserted disposable cartridge 2 that is movable in a direction substantially parallel with respect to the electrode array 9 of the respective cartridge accommodating site 8. Such front- or top-loading can be supported by a drawing-in automatism that, following a partial insertion of a disposable cartridge 2, transports the cartridge 2 to its final destination within the cartridge accommodation site 8, where the cartridge 2 is precisely seated. Preferably, these cartridge accommodation sites 8 do not comprise a movable cover plate 12. After carrying out all intended manipulations to the samples in liquid droplets, the used cartridges 2 can be ejected by the drawing-in automatism and transported to an analysis station or discarded.
[0085] In a second variant (see the two cartridge accommodation sites 8 on the right and left of the base unit 7), the cartridge accommodation sites 8 comprise a cover plate 12 that is configured to be movable with respect to the electrode array 9 of the respective cartridge accommodating site 8. The cover plate 12 preferably is configured to be movable about one or more hinges 16 and/or in a direction that is substantially normal to the electrode array 9.
[0086] Similar to the possibilities for inserting a disposable cartridge 2 into a cartridge accommodation site 8, possibilities for inserting the electrode board 41 into a board accommodation site 40 comprise the following alternatives:
(a) vertically lowering the electrode board 41 through the respective cartridge accommodation site 8 and into the board accommodation site 40;
(b) horizontally sliding the electrode board 41 below the respective cartridge accommodation site 8 and into the board accommodation site 40;
(c) horizontally sliding the electrode board 41 below the respective cartridge accommodation site 8 and substantially vertically lifting into the board accommodation site 40.
[0087] In
[0088] The digital microfluidics system 1 also comprises a central control unit 14 for controlling the selection of the individual electrodes 10 of said at least one electrode array 9 and for providing these electrodes 10 with individual voltage pulses for manipulating liquid droplets within said cartridges 2 by electrowetting. As partly indicated in
[0089] The at least one cover plate 12 preferably comprises an electrically conductive material that extends in a second plane and substantially parallel to the electrode array 9 of the cartridge accommodation site 8 the at least one cover plate 12 is assigned to. It is particularly preferred that this electrically conductive material of the cover plate 12 is configured to be not connected to a source of an electrical ground potential. The cover plate 12 can be configured to be movable in any arbitrary direction and no electrical contacts have to be taken in into consideration when selecting a particularly preferred movement of the cover plate 12. Thus, the cover plate 12 may be configured to be also movable in a direction substantially parallel to the electrode array 9 and for carrying out a linear, circular or any arbitrary movement with respect to the respective electrode array 9 of the base unit 7.
[0090] The
[0091] The cover plate 12 is mechanically connected with the base unit 7 of the digital microfluidics system 1 via a hinge 16; thus, the cover plate 12 can swing open and a disposable cartridge 2 can be placed on the cartridge accommodation site 8 via top-entry loading (see
[0092] The cover plate 12 is configured to apply a force to a disposable cartridge 2 that is accommodated at the cartridge accommodation site 8 of the base unit 7. This force urges the disposable cartridge 2 against the electrode array 9 in order to position the bottom layer 3 of the cartridge as close as possible to the surface of the electrode array 9. This force also urges the disposable cartridge 2 into the perfect position on the electrode array 9 with respect to a piercing facility 18 of the cover plate 12. This piercing facility 18 is configured for introducing sample droplets into the gap 6 of the cartridge 2. The piercing facility 18 is configured as a through hole 19 that leads across the entire cover plate 12 and that enables a piercing pipette tip 20 to be pushed through and pierce the top layer 4 of the cartridge 2. The piercing pipette tip 20 may be a part of a handheld pipette (not shown) or of a pipetting robot (not shown).
[0093] In the case shown in
[0094] In one example, the bottom substrate 11 or the PCB that contains the electrode array 9 or the electrodes 10 has an electrical connector, which connects to a relay PCB, which is connected to a control PCB, wherein the control PCB is part of the central control unit 14.
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[0096] Further the cartridge 2 comprises an upper part 4, a spacer 5, a hydrophobic layer 3″, a support element 11′ for the electrode array 9′, an optional through hole 19, a liquid input port 19′ and electrically conductive material. The upper part 4 and the spacer 5 may be provided as separate parts or in form of a single piece. The hydrophobic layer 3″, the electrode array 9′ and the support element 11′ form the lower part of the cartridge. The electrode array 9′ is arranged between the hydrophobic layer 3″ and the support element 11′ and the gap is formed between the upper part 4 and the hydrophobic layer 3″. Further, the hydrophobic layer 3″ is attached to a peripheral side structure of the upper part 4 resp. to the spacer 5. The support element 11′ further comprises electrical connectors 14′, which are connected via multiple electrical wires to the electrode array 9′. In turn, the electrical connectors 14′ provide for a connection to a central control unit 14 such that the electrical connectors 14′ implement an electrical interface between cartridge 2 and the digital microfluidics system 1. The electrical interface can also be implemented by a contact field, i.e. a plurality of electrically conductive, mutually insulated contact areas.
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[0098] Preferably, the flexible bottom layer 3 is reversibly attached to the electrodes 10 in an electrowetting sample processing system 1. The spacer 5 may be a part of the cartridge 2 or a part of the electrowetting sample processing system 1. In one example, the spacer 5 comprises stainless steel, aluminum, hard plastic, in particular COP or ceramic. The spacer 5 may be designed to define the height of the gap 6. The spacer 5 may additionally serve as a gasket for sealing the gap 6.
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[0100] In one example the second droplet detector 71 monitors an electrical characteristic between the activated electrodes 10′ and the non-activated electrode underneath the entrance of the inlet port 19′, in particular a potential difference.
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[0105] Small quantities of processing liquid 61, enclosed by carrier liquid 60, are introduced in the cartridge 2 through the inlet port 19′. The introduced processing liquid 61 accumulates in the capture zone, i.e. in the zone of influence of the activated electrodes 10′. The carrier liquid 60 bypasses the capture zone. When the accumulated processing liquid 61 has reached the required size of the liquid droplet 23, the droplet 23 is moved away from the inlet port 19′ by altering the state of some of the electrodes 10, i.e. by activating some of the neighboring electrodes 10 and by deactivating some of the electrodes 10 closest to the inlet port 19′.
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[0108] In this example, the figure shows a top view of the membrane 3′ (transparent) with the electrode array 9 arranged underneath the membrane 3′. The electrode array 9, i.e. the set of individual electrodes 10, is positioned such that the electrode closest to the inlet port 19′ (i.e. a capture electrode) covers less than 50% of the opening of the inlet port 19′ (indicated as circle divided in half).
[0109] In a first step to the method, the electrodes 10 are activated to become activated electrodes 10′ in anticipation of the arrival of a droplet via the inlet port 19′. The activates electrodes 10′ define the capture zone 62, wherein the number of activated electrodes 10′ depends on the volume to be captured.
[0110] In a further step, the droplet 23 is captured by the activated electrodes 10′, depicted in
[0111] The term “covering” describes a geometrical overlapping configuration in a projection longitudinally to an axis of the inlet port and/or along an axis of flow exiting the opening area of the inlet port. This corresponds to a visual appearance viewed along an optical axis, which is perpendicular to the electrode array in a direction towards the electrode array. In an actual configuration, further elements may or may not be present between the opening of the inlet port 19′ and the one or more electrodes 10′,10″ such as a hydrophobic foil, a processing liquid, an empty space in the gap or an electrowetting filler liquid.
[0112]
a) 5-50% coverage;
b) 50% coverage; and
c) 55-95% coverage.
[0113] In a preferred configuration, the coverage is approximately 50%, other configurations are also possible, e.g. between 5% and 95% of the opening area of the inlet port, between 10% and 90% or between 25% and 75%. These configurations provide sufficient room for a transfer zone that is configured to provide a passage for a carrier liquid next to the microfluidic droplet while processing liquid is captured in the capture zone.
[0114]
a) one electrode activated for accumulating and capturing process liquid, and
b) four electrodes activated for accumulating and capturing bigger amounts of process liquid.
[0115] During the capturing of an initial droplet neighboring electrodes are activated for enlarging the droplet and moving the already captured liquid over a plurality of electrodes. The neighboring electrodes can be further capturing electrodes or transport electrodes.
[0116] Preferred dimensions and materials are pointed to in table 1. These indications of materials and dimensions serve as preferred examples without limiting the scope of the present invention.
TABLE-US-00001 TABLE 1 Part No Material Dimensions and Shape Droplet 23 aqueous Volume: 0.1-5 μl Substrate 11 PCB; — Synth. Polymer Electrodes 10 Al; Cu; Au; Pt Plating: 1.5 × 1.5 mm Electrode Array 9 Electrodes 1 or 2 dimensional .sup. 9′ Film 3 Fluorinated thickness: 8-50 μm ethylene propylene (FEP), Cyclo olefin polymer (COP), Polypropylene (PP) Hydrophobic 17 Teflon ® (PTFE), thickness: 8-50 μm surface COP, FEP, PP, Coating: 2-200 nm Cytop Spin coating: 5-500 nm, preferably 20 nm Rigid cover 4 Mylar ®; acrylic; 65 × 85 mm; Polypropylene (PP) Plate: 0.5-25.0 mm, preferably 1.5 mm Gap 6 — 0.2-2.0 mm, preferably 0.5 mm Pipetting 19 — Diameter: 0.3-3.0 mm orifice Spacer, 5 Polypropylene Frame: 0.2-2.0 mm, Gasket (PP), Synthetic preferably 0.5 mm or natural rubber Carrier liquid 60 Silicon oil Volume: 1 μl-10 ml
TABLE-US-00002 REFERENCE SIGNS LIST 1 electrowetting sample processing system 2 disposable cartridge 3 bottom layer 3′ membrane 3″ hydrophobic layer 4 top layer 5 spacer 6 gap between 3 and 4 7 base unit 8 cartridge accommodation site 9, 9′ electrode array 10 electrode 10′ activated electrode 10″ non-activated electrode 11 bottom substrate 11′ support element 12 cover plate 13 top substrate 14 central control unit 15 electrically conductive material 16 hinge 17 hydrophobic surface 18 piercing facility 19 through hole 19′ inlet port 19″ channel 20 piercing pipette tip 21 compartment 22 additional piercing facility 23 liquid droplet 24 dielectric layer 26 disposable pipette tip 27 piercing pin 40 board accommodation site 41 electrode board 42 electrical board contact elements 44 PCB border 50 supply channel 60 carrier liquid 61 processing liquid 62 capture zone 62′ capture electrode 63 transfer zone 70 droplet detector 71 droplet detector