METHOD AND DEVICE FOR NON-INVASIVELY CLASSIFYING A TUMOROUS MODIFICATION OF A TISSUE
20200170579 ยท 2020-06-04
Inventors
Cpc classification
A61B2576/02
HUMAN NECESSITIES
G01R33/5608
PHYSICS
A61B5/055
HUMAN NECESSITIES
G16H50/20
PHYSICS
A61B6/5247
HUMAN NECESSITIES
A61B5/7264
HUMAN NECESSITIES
A61B8/5261
HUMAN NECESSITIES
International classification
A61B5/00
HUMAN NECESSITIES
A61B5/055
HUMAN NECESSITIES
A61B6/00
HUMAN NECESSITIES
Abstract
A method for non-invasively classifying a tumorous modification of a tissue according to different stages of the tumorous modification comprises the steps of: a) receiving raw magnetic resonance imaging (MRI) data that has been recorded by applying at least one diffusion weighted imaging (DWI) sequence using three to nine different b-values to a tissue being suspicious to a tumorous modification without application of a contrast agent; b) extracting at least two quantification scheme parameters from the raw MRI data by using at least one quantification scheme, wherein each of the quantification scheme parameters is related to a microstructural property of the tissue; c) applying a weight to each quantification scheme parameter, wherein the weight is dependent on a kind of the tissue and on the quantification scheme, whereby a set of weighted quantification scheme parameters is obtained; d) determining a scoring value by combining the weighted quantification scheme parameters within the set, wherein each of the weighted quantification scheme parameters is used only once for determining the scoring value; and e) classifying the tumorous modification of the tissue into one of at least two classes according to the scoring value. The method and a corresponding classification device are capable of performing non-invasive tissue characterization without contrast agent administration in a highly accurate manner while supplementary information related to conventional imaging properties and clinical information can further increase the high diagnostic accuracy. They are used in their entirety for classifying the tumorous modification of the tissue.
Claims
1. A computer-implemented method for non-invasively classifying a tumorous modification of a tissue into one of at least two classes, wherein each class refers to a different stage of the tumorous modification, wherein the method comprises the steps of: a) receiving raw magnetic resonance imaging (MRI) data that has been recorded by applying at least one diffusion weighted imaging (DWI) sequence using three to nine different b-values to a tissue being suspicious to a tumorous modification without application of a contrast agent; b) extracting at least two quantification scheme parameters from the raw Mill data by using at least one quantification scheme, wherein each of the quantification scheme parameters is related to a microstructural property of the tissue; c) applying a weight to each quantification scheme parameter, wherein the weight is dependent on a kind of the tissue and on the quantification scheme, whereby a set of weighted quantification scheme parameters is obtained; d) determining a scoring value by combining the weighted quantification scheme parameters within the set, wherein each of the weighted quantification scheme parameters is used only once for determining the scoring value; and e) classifying the tumorous modification of the tissue into one of at least two classes according to the scoring value.
2. The method of claim 1, wherein the tissue is a human tissue in vivo and wherein the tumorous modification is selected from the group consisting of breast cancer, cervix cancer, and prostate cancer.
3. The method of claim 1, wherein the stage of the tumorous modification is selected from one of benign or malignant; or benign, clinically insignificant, or clinically significant.
4. The method of claim 1, wherein the at least one diffusion weighted imaging (DWI) sequence uses three to nine different b-values, wherein the b-value is correlated with a magnetic field gradient as used for generating the DWI sequence.
5. The method of claim 4, wherein the b-value is selected from a range of 0 to 4000 s/mm.sup.2, wherein two adjacent b-values are separated from each other by at least 50 s/mm.sup.2.
6. The method of claim 1, wherein the quantification scheme is selected from diffusional kurtosis imaging (DKI), traditional monoexponential model, intravoxel incoherent motions (IVIM), or fractional order calculus (FROC), and wherein the quantification scheme parameter is selected from ADC; AKC; D-IVIM, or f-IVIM.
7. The method of claim 1, wherein the weight to each quantification scheme parameter is obtained by analyzing at least one training data set, wherein the training data set refers to data comprising a confirmed histopathological analysis.
8. The method of claim 1, wherein the scoring value Q is determined by combining the weighted quantification scheme parameters within the set {k.sub.i, p.sub.i; i=1 . . . n, n2} in accordance with Equation (3) as
Q=k.sub.0+.sub.i=1.sup.n2k.sub.i*p.sub.i, (3).
9. The method of claim 1, wherein a set of m weighted additional data {.sub.j, q.sub.j, j=1 . . . m} is, additionally, used for determining the scoring value in accordance with Equation (4) by
Q=k.sub.0+.sub.i=.sup.n2k.sub.i*p.sub.i+.sub.j=1.sup.m.sub.j*q.sub.j, (4).
10. The method of claim 1, wherein the additional data is obtained from at least one of: a non-invasive imaging modality and clinical data.
11. The method of claim 1, wherein the non-invasive imaging modality comprises at least one of: ultrasound, x-ray imaging, computer tomography, positron emission tomography (PET), or conventional MR sequencing.
12. The method of claim 1, wherein the scoring value is compared with at least one score cut-off value, by which the tumorous modification of the tissue is classified into one of the at least two classes.
13. At least one non-transitory machine-readable storage medium comprising a plurality of instructions stored thereon that, in response to execution by at least one processor, causes the at least one processor to perform the method of claim 1.
14. A classification device for non-invasively classifying a tumorous modification of a tissue into one of at least two classes, wherein each class refers to a different stage of the tumorous modification, comprising a receiving unit for receiving raw magnetic resonance imaging (MRI) data being recorded by applying at least one diffusion weighted imaging (DWI) sequence using three to nine different b-values to a tissue being suspicious to a tumorous modification without application of a contrast agent; and an evaluation unit comprising a DWI parameter generator, a DWI parameter engine, and a scoring engine, wherein, the DWI parameter generator is configured for providing at least one quantification scheme for further processing of the raw MRI data, wherein the DWI parameter engine is configured for extracting at least two quantification scheme parameters from the raw MRI data by using the quantification scheme, wherein each of the quantification scheme parameters is related to a microstructural property of the tissue, and wherein the scoring engine is configured for providing a set of weighted quantification scheme parameters, for determining a scoring value by combining the weighted quantification scheme parameters and, by using the scoring value, for classifying the tumorous modification of the tissue into one of at least two classes.
15. The classification device of claim 15, further comprising a adjacent context evaluation engine being adapted for providing additional data, wherein the additional data is obtained from at least one of: a tissue morphology engine and clinical information engine.
16. The classification device of claim 16, wherein the tissue morphology engine is adapted for measuring and post-processing tissue-related data by a non-invasive imaging modality, in particular, by ultrasound, x-ray imaging, computer tomography, positron emission tomography (PET), and/or conventional MM, especially conventional MR sequencing.
17. The classification device of claim 17, wherein the non-invasive imaging modality comprises at least one of: ultrasound, x-ray imaging, computer tomography, positron emission tomography (PET), or conventional MR sequencing.
18. The classification device of claim 16, wherein the clinical information engine is configured for providing clinical data.
19. The classification device of claim 19, wherein the clinical data comprises at least one of: patient age, patient weight, patient origin, history of cancer in patient, history of cancer in family, a risk scoring model, an exposure to at least one risk factors potentially increasing the risk of having a malignancy, an infectious disease, a region of a lesion, at least one blood parameter, or a genetic analysis.
20. The method of claim 10, wherein the clinical data comprises at least one of: patient age, patient weight, patient origin, history of cancer in patient, history of cancer in family, a risk scoring model, an exposure to at least one risk factors potentially increasing the risk of having a malignancy, an infectious disease, a region of a lesion, at least one blood parameter, or a genetic analysis
Description
SHORT DESCRIPTION OF THE FIGURES
[0063] Further optional details and features of the present invention may be derived from the subsequent description of preferred embodiments, preferably in combination with the dependent claims. Therein, the respective features may be realized in an isolated way or in arbitrary combinations. The invention is not restricted to the preferred embodiments. Identical reference numbers in the figures refer to identical elements or to elements having identical or similar functions or to elements corresponding to each other with regard to their functionality.
[0064]
[0065]
[0066]
[0067]
[0068]
[0069]
[0070]
DESCRIPTION OF PREFERRED EMBODIMENTS
[0071] For comparison purposes,
[0072] In particular,
[0075] As generally used, the term sensitivity refers to a true positive rate, in particular, to a percentage of patients actually having a malignancy and who were correctly identified as having the malignancy. Further, the term specificity refers to a true negative rate, in particular, to a percentage of patients actually having a benign lesion and who were correctly identified as not having a malignancy. In addition, quantitative values for respective areas (AUC) 118 as determined under each of the curves 112, 114, 116 are indicated in the bottom right of
[0076] Similarly,
[0077] Further,
[0078]
[0079] As schematically depicted in
[0080] The classification device 154 in the particularly preferred embodiment of
[0081] Further, the classification device 154 in the particularly preferred embodiment of
[0082] In the embodiment as schematically depicted in
[0083] In the preferred embodiment of
[0084] Alternatively or in addition, at least one further commonly used magnetic resonance imaging sequence 174 may, additionally, be applied for sequencing within the sequencing unit 158. In this embodiment, the further magnetic resonance imaging sequence 174 may, further, be used in the assessment by the scoring engine 166 to which it may be provided via the adjacent context evaluation engine 170 as optional supplementary information to be included into the analysis of the tissue.
[0085] Alternatively or in addition, the additional data may comprise clinical data, in particular patient age, patient weight, patient origin, history of cancer in patient and/or family, a risk scoring model (such as a GAIL-model for breast cancer), exposure to at least one risk factor potentially increasing the risk of having a malignancy (such as smoking, irradiation, exposure to chemical or biological substances), an infectious disease, a region of a lesion, at least one blood parameter, or a genetic analysis, which may be provided to the adjacent context evaluation engine 170 by using a clinical information engine 176 which may, particularly, be adapted for this purpose.
[0086] By using the adjacent context evaluation engine 170, the additional data can be provided to the scoring engine 166, where the additional data can be processed by combining them with the weighted quantification scheme parameters in order to determine the scoring value to be outputted to the decision output 168 as described above.
[0087]
[0088] Similarly,
[0089] In addition,
[0090] Experimental Results
[0091] Using the method and the device according to the present invention, a clear differentiation between malignant and benign tissue with regard to possible breast, cervix, and prostate cancer could be provided for approximately 400 patients.
[0092] Tablet provides an example of six patients with suspicious breast lesions which were classified by using the method according to the present invention, wherein each of 8 quantification scheme parameters p.sub.i, i=1 . . . 8 were weighted with individual weights k.sub.i, i=1 . . . 8, from which a scoring value Q was determined according to Equation (3) as
Q=k.sub.0+.sub.i=1.sup.8k.sub.i.Math.p.sub.i, (3)
[0093] i.e. by summing up the 8 selected weighted quantification scheme parameters k.sub.i.Math.p.sub.i. The scoring value Q was used to classify the tissue modification into one of the two classes benign and malignant by applying a score cut-off value of 0.
TABLE-US-00001 TABLE 1 BI- Pat. p.sub.1 p.sub.2 p.sub.3 p.sub.4 p.sub.5 p.sub.6 p.sub.7 p.sub.8 Q Hist. RADS 1 0.90 2.04 1.08 0.99 0.60 7.45 0.66 0.16 9.86 malignant 4 2 0.67 1.85 0.94 0.70 0.60 7.44 0.58 0.10 8.91 malignant 4 3 0.42 0.93 0.80 0.52 0.74 6.74 0.42 0.11 6.56 malignant 4 4 1.80 0.60 2.56 1.83 0.79 9.90 1.68 0.09 5.76 benign 4 5 2.24 0.68 2.97 2.91 0.82 14.80 2.02 0.20 5.34 benign 4 6 2.42 0.45 2.66 2.44 0.86 10.75 2.16 0.21 8.21 benign 4
[0094] In a similar manner, Table 2 provides an example of six patients with suspicious prostate lesions which were, again, classified by using the method according to the present invention, wherein each of 9 quantification scheme parameters p.sub.i, i=1 . . . 9 were weighted with individual weights k.sub.i, i=1 . . . 9, from which a scoring value Q was determined according to Equation (3) as
Q=k.sub.0+.sub.i=1.sup.9k.sub.i.Math.p.sub.i, (3)
[0095] i.e. by summing up the 9 selected weighted quantification scheme parameters k.sub.i.Math.p.sub.i. The scoring value Q was, again, used to classify the tissue modification into one of the two classes benign and malignant by applying a score cut-off value of 0.
TABLE-US-00002 TABLE 2 PI- Pat. p.sub.1 p.sub.2 p.sub.3 p.sub.4 p.sub.5 p.sub.6 p.sub.7 p.sub.8 p.sub.9 Q Hist. RADS 1 0.65 1.19 1.00 0.69 0.80 6.92 0.52 0.10 5.38 4.36 malign. 4 2 0.61 1.14 1.27 0.72 0.66 7.37 0.46 0.17 5.35 4.68 malign. 4 3 0.69 1.17 1.32 0.69 0.75 6.46 0.52 0.14 5.40 4.52 malign. 4 4 2.10 0.70 2.44 1.75 0.67 7.63 1.36 0.36 6.88 9.31 benign 4 5 2.07 0.81 2.29 1.91 0.55 8.55 1.21 0.39 6.82 9.22 benign 4 6 2.19 0.64 2.60 2.02 0.68 8.60 1.54 0.31 7.00 8.88 benign 4
[0096] In the following, three further examples are presented for providing further insight into the method according to the present invention.
[0097] Example 1 refers to a patient for prostate cancer by check-up by MRI who was examined after a digital rectal examination with an unclear palpable finding. The patient underwent a prostate MRI examination in a 3T MRI device including a routine protocol as suggested by the PI-RADS ACR protocol. The protocol consisted of morphological sequences without contrast enhancement (T2-weighted), contrast enhanced sequences (T1-weighted) and a diffusion weighted imaging (DWI) sequence with multiple b-values according to the present invention.
[0098] After MRI examination the prostate was evaluated for a suspicious lesion as described in the PI-RADS V2 guidelines using the T2-weighted and DWI weighted imaging sequences. A lesion was detected and classified as a lesion coded with a PI-RADS class 3 (intermediate). The lesion was marked using a segmentation. The raw image data of the lesion was then processed using three different quantification schemes, i.e. Kurtosis, IVIM and the traditional monoexponential model, and three different quantification scheme parameters, i.e. K.sub.Kurtosis, f.sub.IVIM, and D.sub.ADC, were extracted as described elsewhere in this document. The quantification scheme parameters were, subsequently, processed to finally receive a weighted scoring of each quantification scheme parameter resulting in a classifier to predict clinically significant or clinically insignificant data. Herein, the weighting for each parameter was obtained of a raw data training set of approximately 200 patients with histopathologically confirmed lesions.
[0099] In particular, 3 quantification scheme parameters p.sub.1=0.75, p.sub.2=1.29, and p.sub.3=0.15 were combined with 3 corresponding individual weights k.sub.i=15.10, k.sub.2=5.37, k.sub.3=4.61 and k.sub.0=25.09. Based on these data, the scoring value Q could be determined according to Equation (4) as Q=25.09+15.10*0.75+5.37*1.29+(4.61)*0.15=7.53. Applying a score cut-off value of 0, the suspicious prostate lesion was classified into the class clinically significant, which corresponded with the result provided by the histopathology.
[0100] Example 2 refers to a further patient for prostate cancer checkup by MRI who was examined after an elevated blood level of PSA had been found. The patient underwent a prostate MRI examination in the 3T MRI device including a routine protocol as suggested by the PI-RADS ACR protocol. The protocol consisted of morphological sequences without contrast enhancement (T2-weighted), contrast enhanced sequences (T1-weighted) and a diffusion weighted imaging (DWI) sequence with multiple b-values according to the present invention.
[0101] After MRI examination the prostate was evaluated for a suspicious lesion as described in the PI-RADS V2 guidelines using the T2-weighted and DWI weighted imaging sequences. A lesion was detected and classified as a lesion coded with a PI-RADS class 3 (intermediate). The lesion was marked using segmentation. The raw image data of the lesion was then processed using two different quantification schemes, i.e. Kurtosis, IVIM and the traditional monoexponential model, and three different quantification scheme parameters, i.e. K.sub.Kurtosis, f.sub.IVIM, and D.sub.ADC, were extracted as described in the patent application. The quantification scheme parameters were, subsequently, processed to finally receive a weighted scoring of each quantification scheme parameter resulting in a classifier to predict clinically significant or clinically insignificant data. Herein the weighting for each parameter was obtained of a raw data training set of approximately 200 patients with histopathologically confirmed lesions.
[0102] In particular, the 3 quantification scheme parameters p.sub.1=2.06, p.sub.2=0.62, and p.sub.3=0.24 were, again, combined with the same 3 corresponding individual weights k.sub.1=15.10, k.sub.2=5.37, k.sub.3=4.61 and k.sub.0=25.09 as in Example 1 above. Based on these data, the scoring value Q could be determined according to Equation (4) as Q=25.09+15.10*2.06+5.37*0.62+(4.61)*0.24=8.24. Applying a score cut-off value of 0, the suspicious prostate lesion was classified into the class clinically insignificant, which corresponded with the result provided by the histopathology.
[0103] Example 3 refers to patient with a suspicious breast lesion who was examined due to a suspicious finding on X-ray mammography screening. The patient underwent a regular breast MRI scan using a 1.5 T MRI device. Herein, the acquired image sequences consisted of a regular breast imaging protocol with unenhanced T1-weighted and T2-weighted sequences, dynamic contrast enhanced T1-weighted imaging sequences, and a diffusion weighted imaging (DWI) sequence with multiple b-values according to the present invention.
[0104] A lesion was detected that provided an unclear rating according to the BI-RADS classification scheme (BI-RADS 3). Applying the invention procedure out of the detected and segmented lesion eight different quantification scheme parameters were extracted using different quantification schemes, i.e. the traditional monoexponential model, Kurtosis, IVIM, and FROC. With further allowing the scoring engine to not only use a weighted scoring of the quantification scheme parameters but also clinical information in terms of the patient age it was possible to classify this lesion as malignant which, being in contrast to the suggestion of the conventional BI-RADS criteria, was confirmed by histopathology. The weighting for the scoring engine was based on training of approximately 200 cases.
[0105] In particular, 8 quantification scheme parameters p.sub.1=0.57, p.sub.2=1.22, p.sub.3=2.27, p.sub.4=0.69, p.sub.5=0.52, p.sub.6=11.40, p.sub.7=0.62, and p.sub.a=0.38 were combined with 8 corresponding individual weights k.sub.1=5.12, k.sub.2=5.94, and k.sub.3=0.8, k.sub.4=3.38, k.sub.5=9.95, k.sub.6=0.23, k.sub.7=4.55, k.sub.8=10.69 and k.sub.0=3.03. Based on these data, the scoring value Q could be determined according to Equation (4) as Q=3.03+5.12*0.57+(5.94)*1.22+0.80*2.27+(3.38)*0.69+(9.95)*0.52+0.23*11.40+4.55*0.62+(10.69)*0.38=5.61. Applying a score cut-off value of 0, the suspicious prostate breast was classified into the class malignant, which corresponded with the result provided by the histopathology.
[0106] As a result, the method according to the present invention allows determining different scoring values in malignant lesions compared to scoring values in benign lesions with a significant difference. The separation between malignant tissue and benign tissue for both prostate and breast lesions was found to be comparable or superior to conventional classification schemes of imaging using BI-RADS (Breast Imaging Reading and Documentation System) and PI-RADS (Prostate Imaging Reading and Documentation System) with conventional imaging protocols that include a combination of T1-weighted imaging before and after intravenous contrast administration, conventional DWI with ADC maps, and T2-weighted imaging.
[0107] Although limited to the description of using the method and device according to the present invention in breast and prostate tissue imaging, both the method and device are expected to be of added value for further kinds of tumorous modification in various tissues.
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LIST OF REFERENCE NUMBERS
[0130] 110 scheme
[0131] 112 ROC curve
[0132] 114 ROC curve
[0133] 116 ROC curve
[0134] 118 AUC area
[0135] 120 scheme
[0136] 122 ROC curve
[0137] 124 ROC curve
[0138] 126 ROC curve
[0139] 128 AUC area
[0140] 130 ROC curve
[0141] 132 AUC area
[0142] 150 classification system
[0143] 152 magnetic resonance imaging device
[0144] 154 classification device
[0145] 156 magnetic resonance unit
[0146] 158 sequencing unit
[0147] 160 diffusion weighted imaging unit
[0148] 162 DWI parameter generator
[0149] 164 DWI parameter engine
[0150] 166 scoring engine
[0151] 168 decision output
[0152] 170 adjacent context evaluation engine
[0153] 172 tissue morphology engine
[0154] 174 magnetic resonance imaging sequence
[0155] 176 clinical information engine
[0156] 190 ROC curve
[0157] 192 AUC area
[0158] 194 ROC curve
[0159] 196 AUC area
[0160] 198 ROC curve
[0161] 200 AUC area