SIGNAL PROCESSING IN MAGNETOMETER FOR MEDICAL USE
20190365266 ยท 2019-12-05
Assignee
Inventors
- Benjamin Thomas Hornsby Varcoe (Leeds, GB)
- David Diamante Dimambro (Leeds, GB)
- Abbas Ahmad Al-Shimary (Leeds, GB)
- Richard Theodore Grant (Leeds, GB)
Cpc classification
A61B5/7239
HUMAN NECESSITIES
International classification
Abstract
A method of using a magnetometer system to analyse the magnetic field of a region of a subject's body is disclosed. The method comprises obtaining one or more signals corresponding to the time derivative of the time varying magnetic field of a region of a subject's body, averaging the time derivative signal or signals over plural periods, and using the averaged time derivative signal or signals to analyse the magnetic field generated by the region of the subject's body.
Claims
1. A method of using a magnetometer system to analyse the magnetic field of a region of a subject's body, the method comprising: obtaining one or more signals corresponding to the time derivative of the time varying magnetic field of a region of a subject's body; averaging the time derivative signal or signals over plural periods; and using the averaged time derivative signal or signals to analyse the magnetic field generated by the region of the subject's body.
2. The method of claim 1, wherein obtaining one or more signals corresponding to the time derivative of the time varying magnetic field of the region of the subject's body comprises: using a detector to produce a signal having a time varying magnitude that corresponds to the time derivative of the time varying magnetic field of the region of the subject's body.
3. The method of claim 1, wherein obtaining one or more signals corresponding to the time derivative of the time varying magnetic field of the region of the subject's body comprises: using a detector to produce a signal having a time varying magnitude that corresponds the time varying magnetic field of the region of the subject's body; and differentiating the produced signal to obtain a signal corresponding to the time derivative of the time varying magnetic field of the region of the subject's body.
4. (canceled)
5. (canceled)
6. (canceled)
7. The method of claim 1, wherein the one or more obtained signals comprise one or more digitised signals, and the method comprises: averaging the digitised time derivative signal or signals over plural periods; and using the averaged digitised time derivative signal or signals to analyse the region of the subject's body.
8. The method of claim 1, wherein averaging the time derivative signal or signals over plural periods comprises: using a trigger to identify each repeating period of the time derivative signal or signals; and averaging the signal over the plural identified periods; wherein the trigger is determined using a time derivative signal or signals.
9. The method of claim 1, further comprising filtering the time derivative signal or signals.
10. The method of claim 1, wherein using the averaged time derivative signal or signals comprises at least one of: extracting one or more diagnostic parameters from the averaged time derivative signal or signals and using the averaged time derivative signal or signals without integrating.
11. (canceled)
12. The method of claim 1, wherein the region of the subject's body comprises one of: the abdomen, bladder, heart, head, brain, chest, womb, one or more foetuses, or a muscle.
13. A magnetometer system for medical use, comprising: one or more detectors for detecting the time varying magnetic field of a region of a subject's body; detection circuitry configured to obtain from the one or more detectors one or more signals corresponding to the time derivative of a detected time varying magnetic field; and averaging circuitry configured to average the time derivative signal or signals over plural periods; wherein the magnetometer system is configured to use the averaged time derivative signal or signals to analyse the magnetic field generated by the region of the subject's body.
14. The system of claim 13, wherein the one or more detectors and the detection circuitry is configured to produce a signal or signals having a time varying magnitude that corresponds to the time derivative of the time varying magnetic field of the region of the subject's body.
15. The system of claim 13, wherein the one or more detectors and the detection circuitry is configured to produce a signal or signals having a time varying magnitude that corresponds the time varying magnetic field of the region of the subject's body; and wherein the system further comprises processing circuitry configured to differentiate the magnetic field signal or signals to obtain the signal or signals corresponding to the time derivative of the time varying magnetic field of the region of the subject's body.
16. A electrocardiography system for medical use, comprising: one or more detectors for detecting the time varying electric potential of a region of a subject's body; detection circuitry configured to obtain from the one or more detectors one or more signals corresponding to the time derivative of a detected time varying electric potential; and averaging circuitry configured to average the time derivative signal or signals over plural periods; wherein the electrocardiography system is configured to use the averaged time derivative signal or signals to analyse the electric potential generated by the region of the subject's body.
17. The system of claim 16, wherein the one or more detectors and the detection circuitry is configured to produce a signal or signals having a time varying magnitude that corresponds to the time derivative of the time varying electric potential of the region of the subject's body.
18. The system of claim 16, wherein the one or more detectors and the detection circuitry is configured to produce a signal or signals having a time varying magnitude that corresponds to the time varying electric potential of the region of the subject's body; and wherein the system further comprises processing circuitry configured to differentiate the electric potential signal or signals to obtain the signal or signals corresponding to the time derivative of the time varying electric potential of the region of the subject's body.
19. The system of claim 13, wherein: the one or more obtained signals comprise one or more digitised signals; the averaging circuitry is configured to average the digitised time derivative signal or signals over plural periods; and the system is configured to use the averaged digitised time derivative signal or signals to analyse the region of the subject's body.
20. The system of claim 13, wherein the averaging circuitry is configured to average the time derivative signal or signals over plural periods by: using a trigger to identify each repeating period of the time derivative signal or signals; and averaging the signal over the plural identified periods; wherein the averaging circuitry is configured to determine the trigger using a time derivative signal or signals.
21. The system of claim 13, further comprising one or more filters configured to filter the time derivative signal or signals.
22. The system of claim 13, wherein the system is configured to analyse the averaged time derivative signal or signals by extracting one or more diagnostic parameters from the averaged time derivative signal or signals.
23. The system of claim 13, wherein the system is configured to analyse the averaged time derivative signal or signals without integrating the averaged time derivative signal or signals.
24. The system of claim 13, wherein the region of the subject's body comprises one of: the abdomen, bladder, heart, head, brain, chest, womb, one or more foetuses, or a muscle.
Description
[0179] A number of preferred embodiments of the present invention will now be described by way of example only and with reference to the accompanying drawings, in which:
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[0200] Like reference numerals are used for like components where appropriate in the Figures.
[0201]
[0202] The magnetometer system comprises a detector 40 coupled to a detection circuit 41 that may contain a number of components. The detector 40 may be an induction coil 40.
[0203] The detection circuit 41 may comprise a low impedance pre-amplifier, such as a microphone amplifier, that is connected to the coil 40, a low pass filter, e.g. with a frequency cut off of 250 Hz, and a notch filter to remove line noise (e.g. 50 or 60 Hz and harmonics).
[0204] The current output from the coil 40 is processed and converted to a voltage by the detection circuit 41 and provided to an analogue to digital converter (ADC) 42 which digitises the analogue signal from the coil 40 and provides it to a data acquisition system 43.
[0205] A biological signal that is correlated to the heartbeat, e.g. an ECG or Pulse-Ox trigger from the test subject may be used as a detection trigger for the digital signal acquisition, and the digitised signal over a number of trigger pulses is then binned into appropriate signal bins, and the signal bins overlaid or averaged, by the data acquisition unit 43. Other arrangements would, however, be possible.
[0206] The coil 40 and detection circuit 41 may be arranged such that the coil 40 and the preamplifier of the detection circuit 41 are arranged together in a sensor head or probe which is then joined by a wire to a processing circuit that comprises the remaining components of the detection circuit 41. Connecting the sensor head (probe) and the processing circuit by wire allows the processing circuit to be spaced from the sensor head (probe) in use.
[0207] With this magnetometer, the sensor head (probe) will be used as a magnetic probe by placing it in the vicinity of the magnetic fields of interest.
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[0211] In this circuit, the outputs from the detection circuits 41 are passed through respective amplifiers 47, 48, respectively, before being provided to the differential amplifier 45. At least one of the amplifiers 47, 48 is tuneable. In use, a known global field 46, such as 50 or 60 Hz (and harmonics) line noise, or a signal, such as a 1 kHz signal, applied by a signal generator 49, is introduced to both coils 40, 44. The presence of a signal on this frequency on the output of the differential amplifier 45, which can be observed, for example, using an oscilloscope 50, will then indicate that the coils 40, 44 are not matched. An amplifier control 51 can then be used to tune the tuneable voltage controlled amplifier 48 to eliminate the global noise on the output of the differential amplifier 45 thereby matching the outputs from the two coils appropriately.
[0212] Most preferably in this arrangement, a known global field of 1 kHz or so is applied to both coils, so as to achieve the appropriate coil matching for the gradient subtraction, but also a filter to remove 50 or 60 Hz (and harmonics) noise is applied to the output signal.
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[0214] The above embodiments of the present invention show arrangements in which there is a single pickup coil that may be used to detect the magnetic field of the subject's heart. In these arrangements, in order then to make a diagnostic scan of the magnetic fields generated by a subject's heart, the single pickup coil can be moved appropriately over the subject's chest to take readings at appropriate spatial positions over the subject's chest. The readings can then be collected and used to compile appropriate magnetic field scans of the subject's heart.
[0215] It would also be possible to arrange a plurality of coil and detection circuit arrangements, e.g. of the form shown in
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[0217] Other array arrangements could be used, if desired, such as circular arrays, irregular arrays, etc.
[0218] More (or less) coils could be provided in the array, e.g. up to 500 coils, or more than 500 coils. For example, where it is desired to measure the magnetic field of a different region of a subject's body (i.e. other than the heart), then an increased number of coils may be provided so as to provide an appropriate number of sampling points and an appropriate spatial coverage for the region of the subject's body in question.
[0219] It would also be possible in this arrangement to use some of the coils 61 to detect the background magnetic field for the purposes of background noise subtraction, rather than for detecting the wanted field of the subject's heart. For example, the outer coils 62 of the array could be used as background field detectors, with the signals detected by those coils then being subtracted appropriately from the signals detected by the remaining coils of the array. Other arrangements for background noise subtraction would, of course, be possible.
[0220] It would also be possible to have multiple layers of arrays of the form shown in
[0221] To measure the magnetic fields generated by the heart, the above arrangements can be used to compile magnetic field scans of a subject's heart by collecting magnetic field measurements at intervals over the subject's chest. False colour images, for example, can then be compiled for any section of the heartbeat, and the scans then used, for example by comparison with known reference images, to diagnose various cardiac conditions. Moreover this can be done for significantly lower costs both in terms of installation and on-going running costs, than existing cardiac magnetometry devices.
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[0223] As used herein, a magnetometer or other apparatus in a magnetically shielded environment may comprise a magnetometer or other apparatus that is either arranged in a specially designed room or enclosure. In such arrangements, both the subject being measured and the equipment doing the measuring are contained within the same shielded enclosure. By contrast, as used herein, a magnetometer or other apparatus in a non-magnetically shielded comprises a magnetometer or other apparatus for which no external piece or pieces of apparatus are used to protect the subject being measured, nor the equipment doing the measuring.
[0224] The magnetometer system can be used in an analogous manner to detect and analyse other medically useful magnetic fields produced by other regions of the body, such as the bladder, head, brain, a foetus, etc.
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[0226] As shown in
[0227] The signal generated by the induction coil in the present embodiment will be the derivative of the magnetic field. However, rather than integrating the output signal over time as would normally be done, the raw derivative signal is instead used for data analysis, etc.
[0228] Accordingly, the use of an induction coil represents a particularly convenient arrangement for obtaining a signal corresponding to the time derivative of the magnetic field, since for example, there is no need to differentiate the signal.
[0229] However, the Applicants have also found that there are benefits, e.g. as described below, when using a detector whose output signal corresponds to the time varying magnetic field, e.g. by differentiating the output signal to obtain a signal corresponding to the time derivative of the time varying magnetic field.
[0230] Thus, in the present embodiment, cardiac signals are analysed using the derivative of the magnetic field, dB/dt, rather than using the magnetic field B, as is conventional. Cardiac signals can also be analysed using the derivative of the voltage, dV/dt, rather than using the voltage V, as is conventional.
[0231] Analysis of the signal in the derivative is beneficial since, amongst other things, signal processing algorithms for the ECG and MCG must solve two conflicting problems, namely to remove background wander and to preserve biological signals which may have vital diagnostic importance. The conflict arises because frequently background effects can themselves have a biological origin.
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[0233] On the other hand, movement of a subject's limbs can cause baseline wander.
[0234] As such, movement of a subject's limbs can create low frequency baseline wander in the ECG signal, while a small shift in the S-T segment of the ECG can indicate myocardial infarction.
[0235] Separating baseline wander from shifts in the S-T baseline is relatively straightforward for a trained physician, but is somewhat more difficult for automated algorithms. The same cannot be said for MCG, principally because MCG lacks the decades of understanding and analysis that underpin the analysis of ECG. However, for a signal processing algorithm the task of separating the two is very challenging.
[0236] In the present embodiment, baseline wander is removed from the signal by using the derivative signal. Baseline drift is very low in frequency and therefore the derivative (dV/dt) is very small (i.e. dt is very large when the frequency of the drift is so small), so that using the derivative can negate the presence of baseline wander in the analysis of the results.
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[0238] The use of the derivative signal can accordingly remove or reduce the need for filtering. This is beneficial since with filtering there is always a risk that real signal will be removed when removing noise. This is particularly the case where the baseline drift is itself a biological signal. This accordingly means that more of the wanted signal can be retained for further analysis.
[0239] In the present embodiment, the derivative data is acquired repeatedly, and signal averaging techniques are applied to the data to produce the average heartbeat. This process is illustrated by
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[0244] It can be seen from
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[0246] As can be seen from
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[0248] As such, the Applicants have recognised that the derivative is a useful tool because (i) high frequency information that has a diagnostic value is naturally present in the derivative; and (ii) no additional filtering is necessary to arrive at the average heartbeat.
[0249] In addition, the low frequency structure of the signal is the same even if bandpass filtering is applied.
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[0252] This can be seen in
[0253] It will be appreciated that the derivative naturally reduces the scale of low frequency information, shifting it to higher frequencies within the complex. This, in turn, allows for filtering to be applied without destroying the relevant information.
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[0255] A sensor 40 and a digitiser 42 are used to obtain a digitised derivative signal 101. As discussed above, this may be done by using the natural signal from a sensor that is configured to output a derivative signal, or by differentiating the digitised signal output from a sensor that is configured to output a magnetic field B or voltage V signal.
[0256] The differentiation may be performed in any suitable manner. Where, for example, the digitised signal comprises a sequence of values,
V(t)=[V.sub.1,V.sub.2,V.sub.3, . . . ,V.sub.n],
and where the values V.sub.i, V.sub.i+1 are separated by a fixed time step t, then the derivative may be approximated by:
[0257] The digitised derivative signal is then averaged 102 over plural periods. This involves using a trigger such as the ECG to determine the plural repeating periods of the signal. Data is taken from the target waveform in each of plural windows around each of plural triggers. Several subsequent windows are averaged to remove random noise.
[0258] The use of the derivative signal is beneficial for this triggering operation, because the trigger is normally defined by the shape of the wave, or by a threshold detection. In either case, the removal of low frequency baseline shifts can improve triggering. Signal averaged ECG normally uses a trigger point derived from the ECG as the averaging position. This is prone to errors arising from baseline shifts whereas trigger derived from the derivative is not.
[0259] Additional filtering 103 may be applied, e.g. to remove noise that cannot be removed by averaging. For example, the digitised time derivative signal or signals may be filtered using (i) a notch filter to remove power line noise; and/or (ii) a bandpass filter to remove environmental noise. The digitised time derivative signal or signals may be filtered to remove external magnetic noise, e.g. arising from power lines and other environmental noise sources such as elevators, air conditioners, nearby traffic, mechanical vibrations, etc.
[0260] The Applicants have found, in particular, that a bandpass filter having a passband around 8-45 Hz can be used to separate the MCG signal from the environmental noise and background noise. The filter is a band pass filter constructed as combination of a high pass filter (removing environmental noise <10 Hz), and a low pass filter (removing background noise >50 Hz).
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[0262] In the present embodiment, in order to approximate such an ideal filter, two windowed-sinc filters are combined to construct a band-pass filter that can separate the MCG signal from environmental noise and background noise. This allows for an efficient separation of the QRS-complex from the environmental noise and other background noise interferences, without phase distortions.
[0263] The filter is configured such that it removes all frequency components below a cut-off frequency f.sub.c1 and above a cut-off frequency f.sub.c2 without affecting frequencies in between. The filter is designed as the difference of two windowed-sinc filters whose cut-off frequencies are f.sub.c1 and f.sub.c2. The filter is able to significantly reduce the impact of environmental noise on the MCG signal, specifically the depolarisation (QRS) section.
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[0265] The filter can be applied in either the time domain or the frequency domain to effectively separate the repolarisation (QRS section) of the MCG signal from the BCG effects and background noise.
[0266] Returning now to
[0267] Thus, following any additional data processing 104, diagnostic parameter extraction 105 may be performed, and used for analysis 106.
[0268] Some examples of medically useful signals that may be analysed are (i) S-T baseline shifts (STEMI) e.g. S-T elevated myocardial infarction (on taking the derivative, this becomes the R-S signal height); and (ii) R-S transition rate, e.g. bundle branch block (on taking the derivative, this becomes the R-S signal height).
[0269] However, in general any of the signal features described herein may have diagnostic importance and may be used for analysis. On taking the derivative, parameters that depend on a rate become a height, and parameters where a transition produces level shifts becomes a measurement of area.
[0270] It will be appreciated that, in the present embodiment, the derivative is used for analysis. The derivative emphasises high frequency information and supresses low frequency information. High frequency information can be diagnostic on its own. In addition, the derivative removes background drift without the need for filtering. It also concentrates information relating to S-T transition level shifts in the R-S region. This is a higher frequency region and therefore this signal can be separated from lower frequency components.
[0271] It should be noted that when analysing the magnetic field in the derivative domain, the rate of change, gradient, or slope of a feature may be used. The gradient of a feature in the integral corresponds to the amplitude of a feature in the derivative. This can allow more detailed or accurate diagnostic information to be obtained.
[0272] For example, as illustrated by
[0273] As can be seen e.g. by comparing
[0274] By contrast, when using the derivative (MCG or ECG) signal, a signal feature (e.g. QRS complex) comprises two peaks, one corresponding to the rising edge (e.g. QR) and one to the falling edge (e.g. the RS) of the time domain feature (e.g. QRS complex). This means that, when using the derivative domain, any difference (imbalance or asymmetry) as described above is much easier to detect, e.g. since the two peaks will have different shapes and/or amplitudes. The same is true for other peaks and signal features in the averaged time derivative signal or signals.
[0275] In addition, small fluctuations on large absolute values (e.g. signals with large offsets or DC biases) can more readily be seen in the derivative than the integral. This is because upwards or downwards trends (or gradients/slopes) can be seen as positive or negative features in the derivative. For a sufficiently offset (or biased) signal, all values may remain positive (or negative) despite small fluctuations making it difficult to establish a trend.
[0276] This is illustrated by
[0277] As also illustrated by
[0278] In addition, for datasets or signals with increasing (or decreasing) DC or low frequency offsets, small fluctuations can more readily seen in the derivative than the integral. This is illustrated by
[0279] As such, using the derivative domain in the manner of various embodiments can make diagnostic measurements more resistant to offsets or (e.g. DC) biases, i.e. since only change is measured. This can make it easier to deal with situations, for example, where a threshold value is of interest and is required to be measured. In particular, this can address the situation where, for example, it is desired to determine the value or location of a change from a positive to negative value in the MCG signal, but where because of an offset or (e.g. DC) bias, all values of the signal are positive or negative.
[0280] It can be seen from above that the present invention provides an improved magnetometer system for medical use.
[0281] This is achieved, in the preferred embodiments of the present invention at least, by obtaining one or more signals corresponding to the time derivative of the time varying magnetic field of a region of a subject's body, averaging the signal or signals, and using the averaged signal or signals to analyse the magnetic field generated by the region of the subject's body.