Process for production of insulin and insulin analogues

Abstract

A process for production of insulin or insulin analogs by expression of Insulin or Insulin analogs through an expression vector in a host cell is provided. The expression vector includes a leader peptide of SEQ ID NO 3; a nucleotide sequence encoding an affinity tag linked to C-terminal end or N terminal end of nucleotide sequence of the leader peptide; and a nucleotide sequence encoding for a cleavage site ligated to nucleotide sequence of the leader peptide through nucleotide sequence encoding the affinity tag.

Claims

1. A process for production of an insulin or insulin analogue, the process comprising expressing the insulin or insulin analogue through an expression vector in bacteria, wherein said expression vector comprises: a first nucleotide sequence encoding a leader peptide of SEQ ID NO:3; a second nucleotide sequence encoding an affinity tag, wherein the affinity tag is expressed linked to a C-terminal end or N-terminal end of said leader peptide; and a third nucleotide sequence encoding a cleavage site, wherein the third nucleotide sequence is ligated to the first nucleotide sequence encoding said leader peptide or to the second nucleotide sequence encoding said affinity tag.

2. The process of claim 1, wherein said leader peptide is expressed as a fusion protein; said fusion protein comprising fusion of said leader peptide of SEQ ID NO:3 and the insulin or inulin analogue.

3. The process of claim 1, wherein said bacteria are E. coli.

4. The process of claim 1, wherein said leader peptide has Methionine at N-terminus, followed by glycine.

5. The process of claim 1, wherein said affinity tag is his-tag.

6. The process of claim 1, wherein said cleavage site is arginine.

7. The process of claim 1, wherein said expression vector further comprises a multiple cloning site (MCS) in upstream region of said first nucleotide sequence encoding said leader peptide; a fourth nucleotide sequence encoding a ribosome binding site (RBS); a promoter or operator sequence downstream of the fourth nucleotide sequence encoding said ribosome binding site; and a fifth nucleotide sequence encoding an antibiotic selection marker in upstream region of said promoter or operator sequence.

8. The process of claim 7, wherein said antibiotic selection marker is kanamycin.

9. The process of claim 6, wherein the insulin or insulin analogue is expressed as a compound of formula: A-L-Arg-B-A-C, L-A-Arg-B-A-C, L-A-Arg-A-C-B or A-L-Arg-A-C-B; wherein A is said affinity tag, L is said leader peptide of SEQ ID NO 3, Arg is arginine, B is B-chain of Proinsulin or Proinsulin analogue, A is A-chain of Proinsulin or Proinsulin Analogue, C is C-chain of Proinsulin or Proinsulin Analogue.

10. The process of claim 9 further comprising digesting said compound with Trypsin to cleave off said leader peptide with affinity tag and C-chain of proinsulin to obtain molecule of insulin or insulin analogues having B-chain and A-Chain.

11. The process of claim 1, wherein said expression vector comprises nucleotide sequence of SEQ ID NO 1.

12. A process for production of a insulin or insulin analogue, the process comprising expressing the insulin or insulin analogue through an expression vector in bacteria, wherein said expression vector comprises: a first nucleotide sequence encoding a leader peptide of SEQ ID NO:3; a second nucleotide sequence encoding an affinity tag, wherein the affinity tag is expressed linked to a C-terminal end or a N-terminal end of said leader peptide; a third nucleotide sequence, wherein the third nucleotide sequence encodes a cleavage site or is a Restriction Enzyme (RE) site, and wherein the third nucleotide sequence is ligated to the first nucleotide sequence of encoding said leader peptide or to the second nucleotide sequence encoding said affinity tag; a multiple cloning site (MCS) in upstream region of the first nucleotide sequence encoding said leader peptide; a fourth nucleotide sequence encoding a ribosome binding site (RBS); a promoter or operator sequence downstream of the fourth nucleotide sequence encoding said ribosome binding site (RBS); and a fifth nucleotide sequence encoding an antibiotic selection marker, wherein the fifth nucleotide sequence is upstream of said promotor or operator sequence.

13. The process of claim 12, wherein said affinity tag is his-tag.

14. The process of claim 12, wherein said cleavage site is arginine.

15. A process for production of an insulin or insulin analogue, the process comprising expressing the insulin or insulin analogue through an expression vector in bacteria, wherein said expression vector comprises SEQ ID NO: 1.

16. The process of claim 15, wherein the bacteria are E. coli.

Description

BRIEF DESCRIPTION OF THE DRAWINGS

(1) For a more complete understanding of the embodiments herein, reference should now be made to the embodiments illustrated in greater detail in the accompanying drawings and described below by way of examples:

(2) FIG. 1 illustrates an expression construct having a leader peptide for production of insulin in bacterial cells, according to an embodiment herein;

(3) FIG. 2 illustrates MALDI-TOF spectrum obtained for Human Insulin and leader peptide obtained post enzymatic digestion of human Proinsulin, in accordance with the embodiments described herein; and

(4) FIG. 3 illustrates SDS PAGE analysis of insulin and insulin analogues expressed in a control vector and in the vector of FIG. 1

DETAILED DESCRIPTION OF THE INVENTION

(5) As required, detailed embodiments are disclosed herein; however, it is to be understood that the disclosed embodiments are merely exemplary, which can be embodied in various forms. Therefore, specific structural and functional details disclosed herein are not to be interpreted as limiting, but merely as a basis for the claims and as a representative basis for teaching one skilled in the art to variously employ the present invention in virtually any appropriately detailed structure. Further, the terms and phrases used herein are not intended to be limiting but rather to provide an understandable description of the invention.

(6) The terms a or an, as used herein, are defined as one or more than one. The term plurality, as used herein, is defined as two or more than two. The term another, as used herein, is defined as at least a second or more. The terms including and/or having, as used herein, are defined as comprising (i.e., open language).

(7) Vector Deposition

(8) The vector pBGBactX is deposited for the patent purposes under Budapest Treaty at the MTCC (Microbial Type of Culture Collection) Chandigarh, India. The deposit was made on Mar. 21, 2013 and accorded deposit number as MTCC 5818. The sequence was characterised using DNA sequencer.

(9) As mentioned, there is a need for plasmid vectors which lead to high yield of insulin and other heterologous proteins through simple purification processes. The embodiments herein provide a plasmid vector having nucleotide sequence listed under SEQ ID NO. 1.

(10) FIG. 1 illustrates an expression construct having a leader peptide, for production of insulin in bacterial cells, according to an embodiment herein. The expression construct includes a DNA sequence, of SEQ ID NO 2 encoding for the leader peptide of SEQ ID NO. 3. The expression construct further includes a DNA sequence encoding an affinity tag in the C-terminal end of the DNA sequence of the leader peptide. In one embodiment, the affinity tag is his-tag or a sequence with 6 histidines in succession. In a preferred embodiment, the DNA sequence encoding the affinity tag is ligated to the N-terminal end of the DNA sequence of, the leader peptide.

(11) Further, the leader peptide DNA sequence with his-tag is ligated to DNA sequence encoding B-chain (for B-C-A conformation) or to DNA sequence encoding A-Chain (A-C-B conformation) of proinsulin via a DNA sequence encoding for arginine. In a preferred embodiment, the DNA sequence encoding for arginine is ligated to the DNA sequence of the leader peptide through the DNA sequence encoding the affinity tag.

(12) The leader peptide of SEQ ID NO. 2 includes DNA sequence encoding for Methionine in its N-terminal end. The DNA sequence for Methionine is followed up by addition of DNA sequence encoding for glycine. The addition of glycine provides stability to the proinsulin-protein fusion. The proinsulin and leader peptide assembly enables single step digestion using Trypsin to separate insulin molecule from leader peptide and C-chain. Furthermore, there is no arginine in the leader peptide sequence.

(13) The leader peptide of SEQ ID NO. 2 is a neutral peptide with nearly as many hydrophobic amino acids as hydrophilic amino acids. In one embodiment, the leader peptide has 49% amino acids as hydrophobic. The neutrality of the leader peptide enables increase in formation of stable proinsulin inclusion bodies when the expression construct of FIG. 1 is expressed in the bacterial cells. Further, inclusion of arginine as the cleavage site for removal of the leader peptide of SEQ ID NO 2 ensures that a single step is required to cleave off the C-chain and the leader peptide from the proinsulin fusion to obtain active insulin.

(14) The DNA sequence for the protein of interest i.e. Insulin or its analogue is inserted in the Multiple Cloning Site (MCS) of the expression vector as shown in FIG. 1. Multiple cloning site or polylinker constitutes a short segment of DNA which contains a number of (generally up to 20) Restriction Enzyme (RE) sitesa standard feature of engineered plasmids.

(15) In a preferred embodiment, the leader peptide and the MCS are custom synthesised as single stranded oligonucleotides, which are used for synthesis of double stranded DNA fragment by PCR. In one embodiment, the overlapping PCR method is used to synthesis double stranded DNA. Optionally, the leader peptide and the MCS may be directly synthesised as double stranded DNA fragments. Further, the RE sites were incorporated at 5 end and the 3 end of the synthesised DNA fragment. Furthermore, a Promoter/Operator region, a Ribosome Binding Site (RBS), an origin of replication and a antibiotic resistant gene were ligated with the PCR amplified DNA sequence coding for leader peptide, followed by MCS containing unique restriction enzyme sites. In one embodiment, the leader peptide is cloned downstream of the RBS, between Nco1 and EcoR1 restriction sites in the MCS.

(16) Accordingly, the cleavage site, to cleave off the leader peptide and elicit a recombinant peptide/protein of interest, may be customised according to the recombinant peptide/protein of interest. The heterologous protein or the protein of interest may be cloned between any of the two RE sites in the MCS.

(17) In an embodiment, the expression construct of FIG. 1 encodes a compound of Formula (I)
A-L-X-P
in which, L is the leader peptide of SEQ ID NO 3, A is the affinity tag, X is the cleavage site and P is a heterologous protein. In another embodiment, the expression construct of Figure encodes a compound of Formula (II)
L-A-X-P

(18) In another embodiment, the expression construct of FIG. 1 encodes a compound of formula (III):
A-L-Arg-B-C-A

(19) Or a compound of formula (IV):
L-A-Arg-B-C-A
in which, L is the leader peptide, A is a his-tag, acting as the affinity tag with six consecutive histidine residues, arginine is the cleavage site that links the leader peptide via the his-tag in its C-terminal end to the B chain of Proinsulin, whereas C is the C chain of Proinsulin and A is the A chain of Proinsulin. In one embodiment, the C-chain of Proinsulin includes an arginine residue only.

(20) In another embodiment, the expression construct of FIG. 1 encodes a compound of formula (V):
L-A-Arg-A-C-B

(21) Or a compound of formula (VI):
A-L-Arg-A-C-B
in which arginine, the cleavage site links the leader peptide via the his-tag in its C-terminal end to the A chain of Proinsulin.

(22) In one embodiment, the leader peptide of SEQ ID NO 2 has first amino acid residue as methionine and the second amino acid residue as glycine, which imparts stability to the leader peptide. The advantage of having the arginine residue as the cleavage site to cleave off the leader peptide post-expression in the bacterial cells is that it enables single step, double reaction based enzymatic digestion of the compounds of formula I, II, III, IV, V or VI.

(23) The embodiments above are further explained through way of examples as follows:

EXAMPLES

Example 1: Construction of Vector

(24) The oligonucleotides for the human proinsulin (hPI) gene were custom synthesized (Sigma Aldrich). The single stranded oligonucleotides were reconstituted in 10 mM TE buffer (pH8.0). The 0.5 uM of each forward and reverse oligonucleotide was used for PCR reaction to form double stranded DNA. The cycling conditions used for the PCR were: one cycle of 95 C. for 5 min for initial denaturation, followed by 35 cycles comprising of denaturation at 95 C. for 20 sec, annealing at 65 C. for 20 sec and elongation at 72 C. for 30 sec. The final extensions of 5 min at 72 C. were included for the complete synthesis of the gene. The series of sequential PCR reactions were carried out to synthesize the complete hPI gene. The EcoRI and XhoI restriction enzyme sites were incorporated at the 5 end and the 3 end of the hPI gene respectively in the final PCR amplification. The sequence ID of the vector synthesized herein is SEQ ID No 1.

Example 2: Purification of hPI Gene

(25) The hPI (human proinsulin) gene was purified using phenol chloroform iso-amyl alcohol (25:24:1 ratio) extraction method and precipitated using ethanol. The pellet obtained was washed with 70% ethanol, air dried and reconstituted in 10 mM Tris buffer (pH 8.0).

Example 3: Cloning hPI Gene in the Vector

(26) 10 ug of the plasmid. DNA described herein and purified hPI gene were digested in 50 l of reaction volume containing 1 restriction buffer with 10 Units each of EcoR I and Xho I (MBI Fermentas). The reaction was incubated for 30 min at 37 C. in the water bath. The digested plasmid DNA and hPI gene were purified using Qiagen gel Extraction Kit and the purified samples were eluted in 30 l of elution buffer. The 10 l ligation reactions were set using different vector to insert ratio and 4 Weiss units of T4 DNA ligase (MBI Fermentas). The ligation reaction were incubated at 4 C. for 16 hours and then transformed into DH5 strain of E. coli. The transformants were selected on Luria agar containing 75 g/ml of Kanamycin. The sequence identity of the desired hPI gene is confirmed by nucleotide sequencing using automated DNA sequencer (CEQ 8000, Beckman Coulter).

Example 4: Transforming E. coli Cells

(27) The vector-hPI DNA was transformed into E. coli expression host BL21 (DE3) and was allowed to grow in standard culture conditions. After the fermentation was completed, the inclusion bodies were isolated after lysing of cells. The inclusion bodies contained human pro-insulin in unfolded form.

Example 5: Isolation and Purification of Refolded Insulin from Human Proinsulin

(28) The inclusion bodies having human proinsulin were further reduced and subjected to refolding using conventional methods in the presence of cysteine and cystine. The cysteine to cystine ratio was used in the ratio of 1:10. The refolding was performed at alkaline pH in the range of 8-10.5, preferably 9.5. The refolding reaction was incubated for 24 h at 4 C. The refolded. Proinsulin was converted to mature insulin by proteolysis using trypsin and Carboxypeptidase b with a ration of Proinsulin to enzyme of 300:1 and 600:1 (w/w), respectively. Digestion was performed in 0.1 M Tris/HCl, 1 mM MgCl.sub.2, pH 7.5 at ambient temperature for 30 min. FIG. 2 illustrates MALDI-TOF spectrum obtained for Human Insulin and leader peptide obtained post enzymatic digestion of human Proinsulin, in accordance with the embodiments described herein. The peak of 5.8 kDa corresponds to Human Insulin and mass of 4.75 kDa corresponds to leader peptide. Hence, proving a single step digestion using the expression vector as described herein.

Example 6: Expression Analysis

(29) SDS PAGE analysis of Human Insulin and Insulin analogues expressed from control vector and the vector described herein was performed. The reaction was run on 15% SDS-PAGE and stained with Coomassie brilliant blue.

(30) FIG. 3 illustrates SDS PAGE analysis of insulin and insulin analogues expressed in a control vector and in the vector of FIG. 1. Lane 1 shows medium molecule weight marker, Lane2 shows Human Insulin uninduced sample from control vector, Lane 3 shows Human Insulin expressed from control vector, Lane 4 shows Human Insulin uninduced sample from the vector described herein, Lane 5 shows Human Insulin expressed from the vector described herein, Lane 6 shows Insulin Aspart uninduced sample from control vector, Lane 7 shows Insulin Aspart expressed from control vector, Lane 8 shows Insulin Aspart uninduced sample from the vector described herein, Lane 9 shows Insulin Aspart expressed from the vector described herein, Lane 10 shows Insulin Lispro uninduced sample from control vector, Lane 11 shows Insulin Lispro expressed from control vector, Lane 12 shows Insulin Lispro uninduced sample from the vector described herein, Lane 13 shows Insulin Lispro expressed from the vector described herein.