Gel Electrophoresis and Transfer Combination using Conductive Polymers and Method of Use
20170131234 ยท 2017-05-11
Assignee
Inventors
Cpc classification
G01N27/44739
PHYSICS
International classification
Abstract
A precast gel/membrane combination unit for use in gel electrophoresis and membrane transfer for protein analysis, and method of use. Transparent electrically conductive plastic/polymer plate(s) house an electrophoresis gel and immunoblotting membrane. The gel and membrane are positioned between two plates of conductive plastics/polymers or plates having an electrically conductive layer or film. During the electrophoresis step, electrical current moves proteins through the gel allowing for protein separation. Then, without removing or reorienting the gel or apparatus, the electrical contacts are switched to allow the flow of electricity to run perpendicularly through the gel via the conductive plastics/polymers, which will allow the proteins to transfer to the membrane housed in the same precast gel/membrane combination unit. The apparatus allows the user to visually see and perform the steps of protein separation and protein transfer to a transfer membrane without transferring the gel or apparatus after the electrophoresis separation phase.
Claims
1. An apparatus for electrophoretic separation and blotting, comprising: a first electrically semi-conductive plate made from a transparent semi-conductive polymer; a second electrically conductive plate made from a semi-conductive polymer, the second electrically semi-conductive plate substantially parallel to the first electrically semi-conductive plate; an electrophoresis gel; and, a blotting membrane; wherein the electrophoresis gel is between the first electrically semi-conductive plate and the blotting membrane; and wherein the blotting membrane is between the electrophoresis gel and the second electrically semi-conductive plate.
2. The apparatus of claim 1, further comprising: a low conductivity gel having a lower conductivity than the electrophoresis gel, wherein the low conductivity gel is between the electrophoresis gel and the blotting membrane, whereby the low conductivity gel prevents migration of macromolecules from diffusing away from the electrophoresis gel and adhering to the blotting membrane during a macromolecule separation phase; a filter paper between the second semi-conductive plate and the blotting membrane, whereby the filter paper, when wet, acts as an ion reservoir and provides substantial electrical contact between the blotting membrane and the second semi-conductive plate to aid in transferring macromolecules from the electrophoresis gel through the low conductivity gel to the blotting membrane; wherein the blotting membrane is at least one of a nitrocellulose membrane, polyvinylidene difluoride (PVDF) membrane, or nylon membrane.
3. The apparatus of claim 1, further comprising electrically conducting wires disposed on or within the first electrically semi-conductive plate, wherein the first electrically semi-conductive plate is characterized as having an outer electrically conductive transparent layer overlaying a transparent plastic having static dissipative properties.
4. The apparatus of claim 3, wherein the outer electrically semi-conductive transparent layer disposed on an inner surface of the first plate, wherein the layer comprises at least one of indium tin oxide, fluorine doped tin, doped zinc oxide, and aluminum-doped zinc-oxide.
5. The apparatus of claim 4, wherein the transparent semi-conductive layer has a thickness of less than 1 mm.
6. The apparatus of claim 1, wherein the first electrically conductive plate is made from a polymer containing one or more types of transparent semi-conducting polymers selected from the group consisting of polyacetylene, poly(pyrrole)s, polyanilines, polythiophene, poly(3,4-ethylenedioxythiophene), poly(p-phenylene) sulfide, poly(p-phenylene vinylene), and their derivatives.
7. The apparatus of claim 1, wherein the first electrically semi-conductive plate and the second electrically conductive plate are substantially rigid and designed to structurally support a slab gel.
8. An apparatus for electrophoretic separation and blotting macromolecules, comprising: a first plate made of a transparent polymer; an electrically semi-conductive transparent layer adjacent to the first plate; a second plate substantially parallel to the first plate; an electrophoresis gel; and, a blotting membrane; wherein the electrophoresis gel is between the electrically semi-conductive transparent layer and the blotting membrane; and, wherein the blotting membrane is between the electrophoresis gel and the second plate.
9. The apparatus of claim 8, further comprising: a first electrically conductive wire array in contact with first plate and the electrically semi-conductive transparent layer; and, whereby the first electrically conductive wire array distributes charge along the electrically conductive transparent layer.
10. The apparatus of claim 9, wherein the electrically semi-conductive transparent layer is an electrically conductive film disposed on an inner surface of the first plate, wherein the electrically semi-conductive film is made of a film containing one or more types of conductive transparent metals selected from the group consisting of indium tin oxide, fluorine doped tin, doped zinc oxide, aluminum-doped zinc-oxide, and their derivatives.
11. The apparatus of claim 8, wherein the first electrically semi-conductive plate is made from a polymer containing one or more types of transparent semi-conducting polymers selected from the group consisting of polyacetylene, poly(pyrrole)s, polyanilines, polythiophene, poly(3,4-ethylenedioxythiophene), poly(p-phenylene) sulfide, poly(p-phenylene vinylene), and their derivatives.
12. The apparatus of claim 8, wherein the transparent semi-conductive layer has a thickness of less than 1 mm.
13. The apparatus of claim 8, wherein the transparent semi-conductive layer has a volume resistivity between 10.sup.4 and 10.sup.5 ohm-cm and the first plate has a volume resistivity between 10.sup.8 and 10.sup.10 ohm-cm.
14. The apparatus of claim 8, further comprising a second electrically conducting wire array adjacent to the second plate, whereby the second electrically conducting wire array distributes electrical charge along the second plate.
15. A system for both electrophoretic separation and blotting macromolecules, comprising: a liquid receptacle tank having an upper buffer chamber and a lower buffer chamber, a front panel, rear panel, and bottom; a first separation phase electrode in the upper buffer chamber; a second separation phase electrode in the lower buffer chamber; a first blotting phase electrode; a second blotting phase electrode; a precast gel/membrane combination unit having (i) a first electrically semi-conductive plate made from a transparent conductive polymer, (ii) a second electrically semi-conductive plate made from a conductive polymer, the second electrically semi-conductive plate substantially parallel to the first electrically semi-conductive plate, (iii) an electrophoresis gel, and (iv) a blotting membrane; and, a power supply, wherein the power supply is configured to apply a voltage to the first separation phase electrode and second separation phase electrode to perform electrophoretic separation of macromolecules along the electrophoresis gel, and wherein the power supply is configured to automatically switch a voltage from the first and second separation phase electrodes to the first and second blotting phase electrodes, whereby switching the voltage allows a user to perform electrophoretic separation of proteins and transfer of proteins onto the blotting membrane.
16. The system of claim 15, wherein the liquid receptacle tank further comprises a cooling chamber housing the first blotting phase electrode; and, a gasket disposed on the rear panel of the liquid tank receptacle, whereby the gasket prevents liquid from flowing from the upper chamber to the lower chamber when the precast gel/membrane combination unit is placed within the liquid receptacle tank.
17. A method for separation and post-separation transfer of macromolecules to a blotting membrane, the method comprising the steps of: providing an apparatus in a first orientation within a liquid receptacle tank, wherein the apparatus has a first electrically conductive plate composed of (i) a transparent semi-conductive polymer, (ii) second electrically semi-conductive plate made of a semi-conductive polymer, the second electrically semi-conductive plate substantially parallel to the first electrically semi-conductive plate, (iii) an electrophoresis gel, and (iv) a blotting membrane, wherein the electrophoresis gel is between the first semi-conductive plate and the blotting membrane, and wherein the blotting membrane is between the electrophoresis gel and the second electrically semi-conductive plate; separating macromolecules along the gel of the apparatus by applying a first electrical driving force to a pair of separation electrodes, wherein separating macromolecules along the gel occurs in the first orientation of the apparatus; and discontinuing the first electrical driving force to the pair of separation electrodes; transferring macromolecules through the gel to the blotting membrane by applying a second electrical driving force substantially perpendicular to the first electrical driving force while maintaining the first orientation of the apparatus, thereby combining the steps of electrophoresis and transfer in a single liquid receptacle tank without having to reorient the apparatus between the separating step and transferring step.
18. The method of claim 17 further comprising the step of: pre-programming a power source automatically to apply the first electrical driving force, discontinuing the first electrical driving force, and applying the second electrical driving force substantially perpendicular to the first electrical driving force.
19. The apparatus of claim 1, wherein the transparent semi-conductive polymer has a volume resistivity between 10.sup.3 -10.sup.8 ohm-cm.
20. The apparatus of claim 1, wherein the transparent semi-conductive polymer has a volume resistivity between 10.sup.3 -10.sup.5 ohm-cm.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0028] These and other features and advantages of the present invention will become appreciated as the same becomes better understood with reference to the specification, claims, and drawings herein:
[0029]
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[0037]
DETAILED DESCRIPTION OF THE DRAWINGS
[0038] The invention now will be described more fully hereinafter with reference to the accompanying drawings, in which embodiments of the invention are shown. This invention may, however, be embodied in many different forms and should not be construed as limited to the embodiments set forth herein. Rather, these embodiments are provided so that this disclosure will be thorough and complete, and will fully convey the scope of the invention to those skilled in the art.
[0039] It will be understood that when an element is referred to as being on another element, it can be directly on the other element or intervening elements may be present therebetween. As used herein, the term and/or includes any and all combinations of one or more of the associated listed items.
[0040] It will be understood that, although the terms first, second, third etc. may be used herein to describe various elements, components, regions, layers, and/or sections, these elements, components, regions, layers, and/or sections should not be limited by these terms. These terms are only used to distinguish one element, component, region, layer, and/or section from another element, component, region, layer, and/or section.
[0041] It will be understood that the elements, components, regions, layers and sections depicted in the figures are not necessarily drawn to scale.
[0042] The terminology used herein is for the purpose of describing particular embodiments only and is not intended to be limiting of the invention. As used herein, the singular forms a, an, and the are intended to include the plural forms as well, unless the context clearly indicates otherwise. It will be further understood that the terms comprises and/or comprising, or includes and/or including when used in this specification, specify the presence of stated features, regions, integers, steps, operations, elements, and/or components, but do not preclude the presence or addition of one or more other features, regions, integers, steps, operations, elements, components, and/or groups thereof.
[0043] Furthermore, relative terms, such as lower or bottom, upper or top, left or right, may be used herein to describe one element's relationship to another element(s) as illustrated in the Figures. It will be understood that relative terms are intended to encompass different orientations of the device in addition to the orientation depicted in the Figures.
[0044] Unless otherwise defined, all terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. It will be further understood that terms, such as those defined in commonly used dictionaries, should be interpreted as having a meaning that is consistent with their meaning in the context of the relevant art and the present disclosure, and will not be interpreted in an idealized or overly formal sense unless expressly so defined herein.
[0045] Exemplary embodiments of the present invention are described herein with reference to idealized embodiments of the present invention. As such, variations from the shapes of the illustrations as a result, for example, of manufacturing techniques and/or tolerances, are to be expected. Thus, embodiments of the present invention should not be construed as limited to the particular shapes of regions illustrated herein but are to include deviations in shapes that result, for example, from manufacturing. The invention illustratively disclosed herein suitably may be practiced in the absence of any elements that are not specifically disclosed herein.
[0046] The present invention is directed to gel electrophoresis and transfer with one precast gel/membrane combination unit 10 using conductive plastics/polymers.
[0047] Electrophoresis may be performed using a variety of methods, including but not limited to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE).
[0048] In one embodiment, the invention is made of the following components: a precast gel/membrane combination unit 10 that includes the gel 6 and transfer/blotting membrane 12 sandwiched between two sheets of conductive plastics/polymers 2, 4. Additionally, a gel having low conductivity 8 separates the gel 6 and membrane 12.
[0049]
[0050] The first conductive plate 2 is made from a transparent conductive material, such as polyanilines, polypryrrols, polythiophenes, or other transparent conductive polymer. The first conductive plate has an outer surface 20 and inner surface 14. The second conductive plate 4 is also made from a conductive material, but need not be transparent. The advantage in using a system that includes a transparent conductive material instead of a non-transparent conductive material is that users often prefer to watch the separation phase of electrophoresis in order to visually determine the extent of protein movement/separation during electrophoresis. Typical plate electrodes are metal and therefore non-transparent. If typical metal plate electrodes are used along the surface of a gel, users cannot determine to what extent proteins have separated during electrophoresis. In one embodiment, only a single conductive plate needs to be transparent for the user to visually determine how much protein movement has occurred because protein movement can be observed by looking at one side of a gel. The second side of the gel 6 will be blocked from view by the transfer/blotting membrane. In a preferred embodiment, the polymer used for the conductive plate 2 has a volume resistivity in the range of 10.sup.3-10.sup.5 ohm-cm, but may be as high as 10.sup.8 ohm-cm.
[0051] Generally, the polymers used to create support structures for electrophoresis gels are polymers, and therefore electrically insulating. However, there is a special class of polymers that intrinsically conduct electricity at levels much higher than semiconductors (up to 1000 S/cm), and their conductivities/resistivities can be controlled through different methods of production. Conductive polymers are organic polymers that conduct electricity. Specifically, they offer electrical conductivity less than metals, and can have properties of plastics, such as transparency. The electrical properties (i.e. resistivity) can be fine-tuned using organic synthesis methods and dispersion techniques. Types of organic conductive polymers include polyacetylene, poly(pyrrole)s (PPY), polyanilines, poly(thiophene)s (PT), poly(3,4-ethylenedioxythiophene) (PEDOT), poly(p-phenylene sulfide (PPS), poly(acetylene)s (PAC), poly(p-phenylene vinylene) (PPV), and their derivatives. Conductive polymers may be made from combinations of conductive polymers or combinations of derivatives of the polymers. Generally, the electrical conductivity of a polymer is created by removing an electron from the polymer's conjugated -orbital via doping and the delocalization of electrons along the polymer backbone.
[0052] To ensure that an electric field is evenly distributed along the entirety of the conductive plates, the composition of the plates should have high static-dissipative properties. To ensure a substantially equal electric field emanating from all regions of each conductive plate, the outer surface of a conductive plate may have one or more thin wires (or nanowires) disposed on its outer surface. The wires may be arranged in an array or grid-like shape or mesh. The wires are unobtrusive so that they do not prevent the user from being able to see the gel through the wires and conductive plate in order to allow the user to monitor protein separation during electrophoresis. Preferred embodiments having wires or grids of wires spaced between 0.5 cm and 1.0 cm apart may be sufficient to create a plate electrode having a substantially even electric field emanating from its surface.
[0053] Referring again to
[0054] Adjacent to the low conductivity gel 8 is a transfer membrane 12. The transfer membrane, also known as an immobilization membrane, may be of any of a wide range of blotting materials, such as blotting paper, nitrocellulose, PVDF, nylon, and other materials, as well as such materials in treated or derivatized form, as well known among those skilled in the art. The use of the membrane 12, and method by which the macromolecules are transferred from the electrophoresis gel 6 through the low conductivity gel 8 to the membrane 12 is discussed in further detail below. The low conductivity gel 8 between the transfer membrane 12 and electrophoresis gel 6 prevents the direct contact of the transfer membrane 12 with the electrophoresis gel 6 during electrophoresis. Since proteins have a high affinity to western blot transfer membranes 12, the low conductivity gel 8 prevents proteins from binding to the surface of the membrane 12 during electrophoresis.
[0055] Adjacent to the transfer membrane 12 is filter paper 60. The filter paper 60 is sandwiched between the high conductive gel 8 and second conductive plate 4. Filter paper 60, when wet, acts as an ion reservoir, thereby aiding in the transfer of macromolecules to the membrane 12. Filter paper also ensures that the transfer membrane 12 stays wet. The transfer membrane 12 and filter paper 60 may be pre-wet prior to assembly of the gel/membrane combination unit 10 with a methanol solution, other wetting buffer, or the filter paper 60 may be wet from the buffer solution used in the electrophoresis and blotting phases. A transfer membrane-wetting buffer typically includes methanol.
[0056] The gel/membrane combination unit 10 of
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[0058] The tank apparatus 30 of
[0059] Gels for protein separation and transfer are usually submerged in an electrolyte containing buffered solution such as Tris-acetate-EDTA (TAE) buffer in a tank apparatus 30. Other buffers may be used depending on the type of gel used in the precast gel/membrane combination unit 10. For example, a Tris-acetate buffer may be used for Tris-acetate gels, whereas 2-(N-morpholino)ethanesulfonic acid (MES) or 3-(N-morpholino)propanesulfonic acid (MOPS) buffers may be used for bis-Tris gels. The buffers in this system should be efficient for both the electrophoresis phase and transfer phase. The tank apparatus 30 has an upper chamber 34 and a lower chamber 36. A first separation phase negative electrode (cathode) 38 is disposed within the upper chamber 34. A second separation phase positive electrode (anode) 40 is disposed within the lower chamber 36. The first and second separation phase electrodes 38, 40 are each connected to a programmable power source (not depicted) to power the separation electrodes 38, 40. Power sources for tank apparatuses for use in electrophoresis and blotting are well known in the art. The desired voltage between the first and second separation phase electrodes 38, 40 is between 80 and 150 volts. The power source employs switching means for electrical isolation of said separation phase electrodes 38, 40 from said blotting transfer electrodes 50, 52.
[0060] The upper chamber 34 and lower chamber 36 are each filled with a buffer solution 56 and are electrically connected to each other via the electrically conducting gel/membrane combination unit 10, which allows negative charges to pass from the first separation electrode 38, through the buffer 56 in the upper chamber 34, through gel 6 to buffer 56 in the lower chamber 36 to the second separation electrode 40. This is accomplished in part due to the conductive polymers housing the gel having higher resistance than the gel they house. The rear panel 68 has one or more openings 74 in its lower region to allow the buffer solution 56 from the lower chamber 36 to fill up to the lower surface 18 of the gel 6 to provide an electrical connection from the second separation electrode 40 to the gel 6. The buffer solution 56 in the upper chamber 34 and lower chamber 36 may be the same buffer solution, or may be different buffer solutions, where in some embodiments, the buffer solution 56 in the upper chamber 34 may include an antioxidant.
[0061] The wires electrify the buffer solution 56 causing the solution in the upper chamber 34 to act as the cathode () and solution in the lower chamber 36 to act as the anode (+). Proteins in a sample buffer containing sodium dodecyl sulfate (SDS), or other buffers that are well known in the art, impart proteins with negative net charge so that when they are in the gel 6, they move from the cathode () 38 to the anode (+) 40 by the electromotive force (EMF) created from the power source as known in the art. By placing proteins in wells 84 in the gel and applying an electric field, the proteins will move through the gel 6 at different rates, determined largely by their mass. Thus, the first separation electrode 38 and second separation electrode 40 act as the cathode and anode, respectively, during the electrophoresis phase that separates proteins and other macromolecules by size.
[0062] The buffer solution 56 in the upper chamber 34 and lower chamber 36 are not in liquid contact with each other, but still in electrical contact with each other. The buffer solution 56 in each chamber 34, 36 is prevented from contact by the gel/membrane combination unit 10 and gaskets 44, 46 that prevent the buffer solution 56 from filling the entirety of the tank apparatus 30. A rear panel gasket 46 is disposed on the inner surface of the rear panel 68 of the tank apparatus 10. The rear panel gasket 46 prevents buffer 56 from contacting a blotting electrode 52, which would cause unwanted electrical current flow during the separation phase. Additionally, there is a lip gasket 44 disposed along the outer surface of the lip 58. The lip gasket 44 prevents buffer solution 56, necessary for the separation phase, from contacting the cooling solution 54 used in the cooling chamber 42. The cooling chamber can be filled with water, buffer, or other type of coolant. Gaskets in the preferred embodiments are made from rubber, silicone, or other materials commonly known in the art that form seals that prevents liquid seepage.
[0063] The rear panel gasket 46 is positioned so that when the precast gel/membrane combination unit 10 is placed within the tank apparatus 30, the outer surface 24 of the second conductive plate 4 contacts and is pressed against the gasket 46. The lip gasket 44 is positioned so that the inner surface of the first conductive plate 2 is pressed against the lip gasket 44. As shown in
[0064] After the separation phase, where the proteins have been separated vertically along the gel 6 due to the electric field created by the upper and lower separation electrodes 38, 40, the electrical current is then shifted from the separation electrodes 38, 40 to transfer electrodes 50, 52 for use in the transfer/blotting phase, which forces the proteins to move from the gel 6 to the membrane 12 via the EMF supplied by the transfer electrodes 50, 52 to the first conductive plate 2 and second conductive plate 4. The first conductive plate 2 is in electrical contact with a first transfer electrode 50 connected to a power source and the second conductive plate 4 is in electrical contact with a second transfer electrode 52. Since the first and second conductive plates 2, 4 are made from conductive plastics, when current is applied to the transfer electrodes 50, 52, the conductive plates 2, 4 act as plate electrodes.
[0065] In the embodiment shown in
[0066] The second transfer electrode 52 is disposed along the inner surface of the rear panel 68 and acts as the anode (+) during the protein transfer/blotting mode. In the embodiment shown in
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[0072] In the preferred embodiment, the separation/transfer buffer 56 will have a volume resistivity of approximately 10-200 ohm-cm. The conductive plastic front plate 2 and rear plate 4 will have volume resistivities in the range of 10.sup.3 to 10.sup.5 ohm-cm. In the case of a thin conductive coating or film 78 on the inner surface of the front plate 2, the volume resistivity of the coating or film will be in the range of 10.sup.4 to 10.sup.5 ohm-cm, and the front plate 2 will be made of a static-dissipative transparent plastic with a volume resistivity of 10.sup.8 to 10.sup.10 ohm-cm. These ranges will allow for the electric current to flow through the gel during the separation phase when a power source is applied to separation electrodes 38, 40 rather than through the front and rear plates 2, 4. Then, when the power source is applied to 50 and 52, or to 76 and 52, the electric current will flow substantially perpendicular to the length of the gel from the front plate 2, through the gels 6, 8 and membrane 12, to the rear plate 4, allowing for the proteins to be embedded on the blotting membrane 12 during the blotting phase. While these ranges have been described in terms of exemplary embodiments, it is to be understood that they are not limiting, whereas any embodiment in which the buffer 56 and gel 6 have a reasonably lower resistivity than the conductive polymers (i.e. plates 2, 4) that house them, and conversely that the conductive polymers (i.e. plates 2, 4) have a reasonably higher conductivity than the buffer 56 and gel 6 will allow for the described separation and transfer phases.
[0073] While the invention has been described in terms of exemplary embodiments, it is to be understood that the words which have been used herein are words of description and not of limitation. As is understood by persons of ordinary skill in the art, a variety of modifications can be made without departing from the scope of the invention defined by the following claims, which should be given their fullest, fair scope.