METHOD FOR DETERMINING TREATMENT RESPONSE OF CELLS
20170087562 ยท 2017-03-30
Inventors
- Wei-Lun Huang (Tainan City, TW)
- Wu-chou SU (Tainan City, TW)
- Wei-pang CHUNG (Tainan City, TW)
- Hai-wen CHEN (Tainan City, TW)
- Hsien-Chang Chang (Tainan City, TW)
Cpc classification
B03C5/005
PERFORMING OPERATIONS; TRANSPORTING
B03C5/028
PERFORMING OPERATIONS; TRANSPORTING
International classification
Abstract
A method for determining a treatment response of cells is provided with steps of providing a un-treated first sample and a treated second sample; applying an electric signal to the first sample and the second sample; obtaining a first motion parameter of the first sample and a second motion parameter of the second sample in the electric signal, respectively; and comparing the first motion parameter and the second motion parameter to determine whether there is a difference. The difference represents that the treatment response exists.
Claims
1. A method for determining a treatment response of cells, comprising steps of: (1) providing a first sample containing a first cell and an electrolyte liquid, and a second sample containing a second cell and the electrolyte liquid, wherein the first cell and the second cell are the same type of cells obtained from a specimen, the second cell is treated by a treatment method, and the first cell is not treated by the treatment method or treated by a comparative treatment method; (2) applying an electric signal to the first sample and the second sample so as to generate a dipole moment effect on the first cell and a dipole moment effect on the second cell, respectively; (3) obtaining at least one first motion parameter from the first cell corresponding to the electric signal, and at least one second motion parameter from the second cell corresponding to the electric signal; and (4) comparing the first motion parameter and the second motion parameter to determine a treatment response of the second cell to the treatment method; wherein a difference between the first motion parameter and the second motion parameter represents that the treatment response exists; or no difference between the second motion parameter and the first motion parameter represents that the treatment response does not exist.
2. The method according to claim 1, wherein in the step (2), the dipole moment effect of the first cell and the dipole moment of the second cell are generated by an electrodynamic method so that the first cell is allowed to move, change a moving direction, accelerate, slow down, rotate, change a rotating direction, increase a rotating speed, decrease a rotating speed, or be motionless; and the second cell is allowed to move, change a moving direction, accelerate, slow down, rotate, change a rotating direction, increase a rotating speed, decrease a rotating speed, or be motionless.
3. The method according to claim 2, wherein the electrodynamic method is dielectrophoresis, traveling-wave dielectrophoresis, or electrorotation.
4. The method according to claim 1, wherein the first motion parameter and the second motion parameter are rotating directions, rotating speeds, rotating angles, rotating angular accelerations, moving directions, moving speeds, moving distances, or accelerations.
5. The method according to claim 1, wherein the treatment method is selected from a group consisting of targeted therapy, radiation therapy, chemotherapy, cell death inhibiting therapy, proliferation accelerating therapy, proliferation inhibiting therapy, angiogenesis accelerating therapy, angiogenesis inhibiting therapy, immune activation therapy, immunosuppressive therapy, thermal therapy, photodynamic therapy, differentiation accelerating therapy, differentiation inhibiting therapy, and the combination thereof.
6. The method according to claim 1, wherein the comparative treatment method is a placebo treatment method, or an invalid treatment method.
7. The method according to claim 1, wherein the treatment response is activation, deactivation, cell death acceleration, cell death inhibition, proliferation acceleration, proliferation inhibition, angiogenesis acceleration, angiogenesis inhibition, immunity activation, immunity suppression, injury, differentiation acceleration, differentiation inhibition, or the combination thereof.
8. The method according to claim 1, wherein the first cell and the second cell are blood cells, mesenchymal stem cells, circulating tumor cells, tumor cells, non-tumor cells, malignant cells, non-malignant cells, gene recombinant cells, non-gene recombinant cells, stem cells, non-stem cells, cancer stem cells, artificial differentiated cells, in vitro cultured cells, xenograft cells, or the combination thereof.
9. The method according to claim 1, wherein the specimen is treated by a pre-treatment, or not treated by a pre-treatment, or the combination thereof.
10. The method according to claim 9, wherein the pre-treatment is a physical treatment, a chemical treatment, a biological treatment, or the combination thereof.
11. The method according to claim 9, wherein the pre-treatment comprises at least one method selected from a group consisting of biochip method, density gradient method, magnetic bead method, flow cytometry method, optical driving method, selective osmotic cell lysis method, particle size selective screening method, enzyme digestion method, in vitro cultivation method, centrifugation method, selective affinity method, and the combination of other physical, chemical, or biological treatment.
12. The method according to claim 1, wherein the specimen comprises body fluids, solid tissues, a non-organized specimen, an in vitro cultivated specimen, an xenograft specimen, or the combination thereof.
13. The method according to claim 1, wherein, when the treatment response exists, the treatment response, according to the degree of the difference, is classified into responding type, intermediate type, and a type requiring other indexes to determine; when the treatment response does not exist, the treatment response is determined as non-responding type.
14. The method according to claim 13, wherein the responding type represents sensitivity to the treatment method; and the nonresponding type represents resistance to the treatment method including de novo resistance and acquired resistance.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0037] The structure and the technical means adopted by the present invention to achieve the above and other objects can be best understood by referring to the following detailed description of the preferred embodiments. Furthermore, if there is no specific description in the invention, singular terms such as a, one, and the include the plural number. For example, a compound or at least one compound may include a plurality of compounds, and the mixtures thereof. If there is no specific description in the invention, % means weight percentage (wt %), and the numerical range (e.g. 10% to 11% of A) contains the upper and lower limit (i.e. 10%A11%). If the lower limit is not defined in the range (e.g. less than, or below 0.2% of B), it means that the lower limit may be 0 (i.e. 0%B0.2%). The proportion of weight percent of each component can be replaced by the proportion of weight portion thereof. The abovementioned terms are used to describe and understand the present invention, but the present invention is not limited thereto.
[0038] One embodiment of the present invention provides a method for determining a treatment response of cells, mainly comprising steps as follows: (S1) providing a first sample and a second sample; (S2) applying an electric signal to the first sample and the second sample; (S3) obtaining at least one first motion parameter of the first sample and at least one second motion parameter of the second sample corresponding to the electric signal, respectively; and (S4) comparing the first motion parameter and the second motion parameter to determine whether there is a difference. The principle and the implementation details of each step in this embodiment of the present invention will be described in detail hereinafter. The treatment method of the present invention comprises all means for providing a therapeutic effect (e.g. a targeted therapy, radiation therapy, or chemotherapy); the treatment response indicates the expected outcomes achieved by the means for providing the therapeutic effect (e.g. messaging inhibition, proliferation inhibition/cells kill, and tumor suppression, etc.).
[0039] First, the method for determining a treatment response of cells according to one embodiment of the present invention is the step (S1): providing a first sample and a second sample. In this step, the first sample and the second sample can be used for comparing the cells before and after treating with a treatment method. The first sample contains a first cell and an electrolyte liquid; the second sample contains a second cell and the electrolyte liquid. That is, the first cell and the second cell are suspended within a medium made of the electrolyte liquid. The first cell and the second cell are obtained from the same type of cell of a specimen, for example, lung cancer cells from the same tissue of the same patient; the white blood cells from the same blood specimen of the same patient, but they are not limited thereto. Preferably, the second cell can be treated by a treatment method. Therefore, it can be understood that the first cell is not treated by the treatment method, and the first cell can be a comparison with the second cell. Thus, the treatment method can be determined whether it is effective (available) for the second cell.
[0040] Optionally, in this step, the first sample and the second sample can be used for comparing a cell treated by a comparative treatment method with a cell treated by the treatment method. The first cell can be treated by the comparative treatment method, and the second cell is treated by the treatment method. The comparative treatment method is for example a placebo treatment method, or an invalid treatment method. Therefore, the first cell can be a negative comparison to be used for determining whether the treatment method is effective (available).
[0041] Optionally, a third sample can be included in this step. The third sample contains a third cell and the electrolyte liquid. The third cell is the same type of cell with the first cell and the second cell in the same specimen, which are for example lung cancer cells obtained from the same tissue of the same patient; the white blood cells obtained from the same blood specimen of the same patient, but they are not limited thereto. Preferably, the third cell is treated by a second treatment method. Therefore, it can be understood that the first cell and the second cell are not treated by the second treatment method, and the first cell and the second cell both can be comparisons with the third cell. Thus, the second treatment method can be determined whether it is more effective (available) than the treatment method. However, the present invention is not limited thereto, the same principle can be applied to analyze the treatment response and the treatment effect of various treatment methods to the same type of cells from the same specimen before administrating the treatment method to the patient.
[0042] The abovementioned treatment method and the second treatment method can be independently selected from a group consisting targeted therapy, radiation therapy, chemotherapy, cell death inhibiting therapy, proliferation acceleration therapy, proliferation inhibition therapy, angiogenesis acceleration therapy, angiogenesis inhibition therapy, immune activation therapy, immunosuppressive therapy, thermal therapy, photodynamic therapy, differentiation accelerating therapy, differentiation inhibiting therapy, other means for providing therapeutic effects, and the combination thereof, but they are not limited thereto. In addition, the treatment method, the second treatment method, and the comparative treatment method can be a treatment program based on the adjustment of doses, drugs, treatment duration, or variables on clinical treatment, but it is not limited thereto. Therefore, the treatment effect of the treatment method or the second treatment method can be estimated before administrating to the patient.
[0043] In one embodiment of the present invention, the first cell and the second cell are blood cells (Red blood cells, platelets, white blood cells), mesenchymal stem cells, circulating tumor cells, tumor cells, non-tumor cells, malignant cells, non-malignant cells, gene recombinant cells, non-gene recombinant cells, stem cells, non-stem cells, cancer stem cells, artificial differentiated cells, in vitro cultured cells, xenograft cells, or the combination thereof, but they are not limited thereto. In one embodiment of the present invention, the specimen is treated by a pre-treatment, or not treated by a pre-treatment, or the combination thereof. The specimen can be a body fluid, such as blood, pleural effusion, or ascites, but it is not limited thereto; the specimen can also be a solid tissue, such as the tissues from surgery or sliced specimen, but it is not limited thereto; the specimen can be a non-organized specimen, such as free cells; the specimen can also be an in vitro cultivated specimen, such as in vitro cultivated blood cells or various stem cells, cancer cells cultivated for a short term in vitro; or the combination of the foregoing specimens. The pre-treatment can be a physical, chemical, biological treatment, or the combination thereof. The pre-treatment can be biochip method, density gradient method, magnetic bead method, flow cytometry method, optical driving method, selective osmotic cell lysis method, particleparticle size selective screening method, enzyme digestion method, in vitro cultivation method, centrifugation method, selective affinity method, other physical, chemical, or biological treatment, and the combination thereof, but it is not limited thereto. The magnetic bead method is for example an immunomagnetic method utilizing antibodies, and a magnetic bead method utilizing aptamer. The optical driving method is for example optical tweezers, or optically induced dielectrophoresis. The selective osmotic cell lysis is for example red blood cell lysis. The particle size selective screening method is for example use of cell strainers having different aperture diameters. The enzyme digestion method is for example a use of collagenase. The in vitro cultivation can be in vitro cultivated blood cells or various stem cells, cancer cells cultivated for a short term in vitro. The selective affinity can be performed by utilizing Nylon Wool and T cells, or Heparin and cells having carbohydrate thereon.
[0044] Next, the method for determining a treatment response of cells according to one embodiment of the present invention is the step (S2): applying an electric signal to the first sample and the second sample. In this step, the first cell and the second cell are allowed to generate a dipole moment effect by the electric signal respectively. The dipole moment effect can be generated by an electrodynamic method so that the first cell or the second cell is allowed to move, change a moving direction, accelerate, slow down, rotate, change a rotating direction, increase a rotating speed, decrease a rotating speed, start moving or be motionless. Optionally, the electrodynamic method can be dielectrophoresis, electrorotation, traveling-wave dielectrophoresis, other way to drive the dipole moment, or the combination thereof.
[0045] Preferably, the electrorotation can be composed by a plurality of electrodes (over three electrode, for example, four, five, six, seven, eight, twelve) and planar or 3D biochip. For example, eight electrodes can be divided into two sets of electrodes and disposed on and under the biochip at the peripheral area. Each set of electrodes includes four electrodes apart each other by 90 degrees, and the two set of electrodes are aligned to each other; the chip is configured to contain the first sample or the second sample. The electrorotation comprises steps of (S2A) applying a negative electrophoresis force through the eight electrodes so as to fix the first cell or the second cell at a center portion of the chip; and (S2B) applying an electric signal through the four electrodes of each set of the electrodes, wherein the electric signal has a periodic variation in value and direction (such as a sine wave), and performs continuous phase variation by time, so as to provide the first cell or the second cell a source of torque.
[0046] Next, the method for determining a treatment response of cells according to one embodiment of the present invention is the step (S3): obtaining at least one first motion parameter of the first sample and at least one second motion parameter of the second sample corresponding to the electric signal, respectively. In this step, the first cell has at least one first motion parameter corresponding to the electric signal. When there are three or more first motion parameters, the first motion parameters can form a first motion parameter curve. The second cell can also have at least one second motion parameter corresponding to the electric signal. When there are three or more second motion parameters, the second motion parameters can form a second motion parameter curve. In one embodiment of the present invention, the first motion parameter and the second motion parameter can be rotating directions, rotating speeds, rotating angles, rotating angular accelerations, moving directions, moving speeds, moving distances, or accelerations, but they are not limited thereto.
[0047] After the step (S3), the method can further comprise a step of (S3A) obtaining at least one third motion parameter of the third sample corresponding to the electric signal. in this step, the third cell has at least one third motion parameter corresponding to the electric signal. When there are three or more third motion parameters, the third motion parameters can form a third motion parameter curve. The third motion parameters can be rotating directions, rotating speeds, rotating angles, rotating angular accelerations, moving directions, moving speeds, moving distances, or accelerations, but they are not limited thereto.
[0048] Furthermore, the first motion parameter, the second motion parameter, and the third motion parameter can be a value obtained from direct measurement or calculation, or be a non-numeric parameter, but they are not limited thereto.
[0049] Optionally, in this step, the first motion parameter, the second motion parameter, the third motion parameter, or more motion parameters in different batch of experiments can be individually or commonly accumulated to form a data bank to assist determination of the same type of cells treated by the same treatment method later. The first motion parameter, the second motion parameter, the third motion parameter, or more motion parameters can be statistic or analyzed the reliability, but they are not limited thereto. For example, when estimating the treatment response of lung cancer cells from a patient A treated by targeted therapy, the data information of lung cancer cells from other patients treated by targeted therapy can be used as assistant indexes for determination.
[0050] Next, the method for determining a treatment response of cells according to one embodiment of the present invention is the step (S4): comparing the first motion parameter and the second motion parameter to determine whether there is a difference to determine a treatment response of the second cell to the treatment method. The difference between the first motion parameter and the second motion parameter represents that the treatment response exists; or no difference between the second motion parameter and the first motion parameter represents that the treatment response does not exist.
[0051] After the step (S4), the method can further comprise a step (S4A) comparing the first motion parameter and the third motion parameter to determine whether there is a difference to determine a second treatment response of the second treatment method. The difference between the first motion parameter and the third motion parameter represents that the second treatment response exists. According to the degree of the difference, the treatment effect of the second treatment method or the treatment method can be determined (more effective or less effective). When the difference between the second motion parameter and the first motion parameter is more than the difference between the third motion parameter and the first motion parameter, the treatment method is more effective, or on the contrary, the second treatment method is more effective. If there is no difference between the third motion parameter and the first motion parameter, which represents that the second treatment response does not exist.
[0052] Optionally, the first motion parameters corresponding to the electric signal can form a curve diagram to observe the trend of the first motion parameters. Similarly, the trend of the second motion parameters can be observed. When the two curves have a significant difference in value or shape, which represents that the two cells have a treatment response or a difference of a treatment response regarding the treatment method; when the two curves have no significant difference in value or shape, which represents that the two cells have no treatment response or no difference of a treatment response regarding the treatment method. In one embodiment of the present invention, according to the degree of the difference, the above have a treatment response can be classified into responding type, intermediate type, and a type requiring other indexes to determine; the above no treatment response represents non-responding type; the above have a difference of a treatment response, according to the degree of the difference, can be classified into more effective/less effective, and a type requiring other indexes to determine; the above no difference of a treatment response represents that the treatment effect has no difference. In one embodiment of the present invention, the treatment response is activation, deactivation, cell death acceleration, cell death inhibition, proliferation acceleration, proliferation inhibition, angiogenesis acceleration, angiogenesis inhibition, immunity activation, immunity suppression, injury, differentiation acceleration, differentiation inhibition, or the treatment response expected by other treatment method, but it is not limited thereto. In one embodiment of the present invention, the above responding type represents sensitivity to the treatment method; and the non-responding type represents primary drug resistance (de novo resistance) or acquired drug resistance to the treatment method.
[0053] To make the method for determining a treatment response of cells provided by the present invention more definite, please refer to the experiment process and the results described in the following.
Experiment 1. Electrorotation
Experiment Apparatus
[0054] As shown in
Experiment Process
[0055] Step. 1: The test cell 20 is placed into an electrolyte liquid with an appropriate conductivity, pH value, and osmolarity, and injected to fill the carrier 30. The conductivity is ranged from 0.01 to 100 mS/cm, preferably 0.1 to 10 mS/cm, for example 0.1, 1, or 10, but it is not limited thereto; the pH value is ranged from 3.5 to 10.5, preferably from 5.5 to 8.5, for example 7.0, 7.2, or 7.4, but it is not limited thereto; the osmolality is ranged from 50 to 2000 mOsm/kg, preferably 250-350, for example 270, 300, or 330 mOsm/kg, but it is not limited thereto. Next, the electrolyte liquid containing the test cell 20 is injected into a containing space on the carrier 30.
[0056] Step 2: A negative electrophoresis force is applied through the upper electrode set 11 and the lower electrode set 12, and the test cell 20 can be pushed toward the middle portion of the upper electrode set 11 and the lower electrode set 12, preferably the center portion of the eight electrodes, thereby fixing the test cell 20.
[0057] Step 3: 360/N of sine wave signal are subsequently applied to the upper electrode set 11 and the lower electrode set 12, wherein N is preferably equal to 4, so that the sine wave of the electrodes have intervals of 90 degrees from each other, but N is not limited thereto. The wave signal of the electrodes aligned to each other can be the same or different, and continuously change the phase thereof by time to provide the source of the torque for electrorotation so that the test cell 20 rotates.
[0058] Step 4: Observing or recording the rotating condition of the test cell 20. Image device such as charge-coupled device (CCD), complementary metal-oxide-semiconductor (CMOS), or other appropriate observation device can be used together with microscopes, but they are not limited thereto.
[0059] Step 5: Calculating rotating speeds of the test cell 20 by using image analysis software (e.g. Image J) or manual analysis, but it is not limited thereto.
[0060] Step 6: Analyzing a test cell 20 treated by a treatment method (e.g. targeted therapy, radiation therapy, or chemotherapy) to obtain relation and the relative degree between the variation of the electrodynamic effect and the treatment response, and further estimate the treatment effect of the test cell 20 treated by the treatment method. The treatment response comprises, but not limited to, messaging inhibition, cell culture formation, or proliferation inhibition/cells kill.
[0061] Treatment Method: targeted therapy, radiation therapy, or chemotherapy.
[0062] Targeted therapy: tyrosine kinase inhibitor (TKI), such as epithelium growth factor receptor (EGFR) specific tyrosine kinase inhibitor (EGFR TKI), including first generation, second generation, and third generation EGFR TKI.
[0063] Experiment 1-1: detecting the rotating speeds of the cells to determine the treatment response including messaging inhibition, proliferation inhibition/cells kill caused by the targeted drug EGFR TKI, and using the corresponding biochemical and cell analysis method to confirm the treatment response. In different lung cancer cells, before administrating EGFR TKI, the trend of the electrorotation speeds corresponding to different frequency of the electric signal is analyzed. The results as shown in
[0064] Referring to
[0065] Referring to
[0066] Referring to
[0067] Referring to
[0068] Experiment 1-2: detecting the variation of the electrorotation speed to determine the tumor inhibition caused from the radiation therapy. Different doses of radiation or a placebo treatment (0 Gy, all steps are the same with the experiment cases, for example, the cells are removed from the incubator to the radiation device, and then placed on the radiation device for a period, but the radiation is not applied thereto) are administrated to PC-9 lung cancer cells, and then the electrorotation and the corresponding cell analysis (cell culture formation) are performed to detect the rotating speeds of the cells and the tumor inhibition of the cells caused by the radiation.
[0069] Referring to
Experiment 2: Traveling-Wave Dielectrophoresis
[0070] As shown in
[0071] As shown in
Experiment Process
[0072] Step. 1: As shown in
[0073] Step 2: A negative electrophoresis force is applied through the set of parallel electrode 14, and the cell A and the cell B can be pushed to start moving.
[0074] Step 3: 360/N of sine wave signal are subsequently applied to the set of parallel electrode 14, wherein N is preferably equal to 4, so that the sine wave of the electrodes have intervals of 90 degrees from each other, but N is not limited thereto. The wave signal of each electrode continuously changes the phase thereof by time to provide the source of the moving force for traveling-wave electrophoresis, thereby generating a dipole moment effect (e.g. movement) to the cell A and the cell B.
[0075] Step 4: Observing or recording the movement condition of the cell A and the cell B. An image device such as charge-coupled device (CCD), complementary metal-oxide-semiconductor (CMOS), and other appropriate observation device can be used together with microscopes, but they are not limited thereto.
[0076] Step 5: Calculating moving speeds of the cells by using image analysis software (e.g. Image J) or manual analysis, but it is not limited thereto.
[0077] Step 6: Analyzing the cell treated by a treatment method (e.g. targeted therapy, radiation therapy, or chemotherapy) to obtain relation and the relative degree between the variation of the electrodynamic effect and the treatment response, and further estimate the treatment effect of the cell treated by the treatment method. The treatment response comprises, but not limited to, messaging inhibition, cell culture formation, or proliferation inhibition/cells kill.
[0078] Treatment Method: Chemotherapy with Taxol.
[0079] Experiment 1: detecting the variation of the moving speeds of the cells to determine the proliferation inhibition/cells kill caused by Taxol for chemotherapy.
[0080] The moving speed of the cell can be obtained by analyzing the moving distance perpendicular to the electrode at different time points. The result is shown in
Experiment 2: Traveling-Wave Dielectrophoresis Applied to Different Specimens
[0081] Referring to
[0082] Compared to the conventional technology, the method for determining a treatment response of cells of the present invention utilize an electrodynamic method to detect the specimen having low purity of the cells effectively, and obtain the variation of the dipole moment effect of the treated cells during a shorter period. In addition, the motion parameters corresponding to the dipole moment effect is used for establishing the relationship between the treatment method and the treatment response which is especially measured from the cell and biochemical analysis, such as the messaging inhibition, and proliferation inhibition/cells kill of the cancer cells caused by targeted drug which inhibits EGFR, the tumor inhibition of the cancer cells caused by the radiation therapy, and the proliferation inhibition/cells kill of the cancer cells caused by the chemotherapy drugs, which are highly associated with the therapeutic effect on the clinical treatment. Therefore, it is possible to estimate the treatment response of a specific cell before the cell is treated by a specific treatment method, or, it can be served as a fast screen method, or used for comparing the effects of different agents (it is very advantageous because only a small amount of cells are required in this analysis), and the method is of great worth in the case of a limited time.
[0083] In addition, comparing to the electrorotation, the traveling-wave DEP has high throughput for determining the treatment response of the cells, and the data analysis of the traveling-wave DEP is easier than that of the electrorotation. Thus, the traveling-wave DEP is a more preferable than the electrorotation according to the present invention.
[0084] The present invention has been described with preferred embodiments thereof and it is understood that many changes and modifications to the described embodiments can be carried out without departing from the scope and the spirit of the invention that is intended to be limited only by the appended claims.